Return to main results Retrieve Phyre Job Id

Job DescriptionP31463
Confidence95.54%DateThu Jan 5 11:47:52 GMT 2012
Rank136Aligned Residues46
% Identity26%Templated2cfxa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Lrp/AsnC-like transcriptional regulator N-terminal domain
Resolution2.4

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........
Predicted Secondary structure 











Query SS confidence 
















































Query Sequence  MKKSITTLDLNLLLCLQLLMQERSVTKAAKRINVTPSAVSKSLAKLRAW
Query Conservation 
       

  
  
  
   

 
 

  
 


 


  
  

  
Alig confidence 

..

















.

























Template Conservation 
 ..

  
  

  
  
 
 .
  


  



  

  

  
   
Template Sequence  MK. . LDQIDLNIIEELKKDSRL. SMRELGRKIKLSPPSVTERVRQLESF
Template Known Secondary structure 

..


S

.
T

T
Template Predicted Secondary structure 

..





.




Template SS confidence 
















































   1. .......10.........20 .........30.........40......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions