Job Description P31463 Confidence 43.39% Date Thu Jan 5 11:47:52 GMT 2012 Rank 373 Aligned Residues 199 % Identity 8% Template d1zbma1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.30

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	E	L	A	A	E	S	P	L	M	M	I	M	L	N	A	L	S	K	Q	I	Y	Q	R	Y	P	Q	A	T	I	K	L	R	N	W	D	Y	D	S	L	D	A	I	T	R	G	E	V	D	I	G	F	S	G	R	E	S	H	P	R	S	R	E	L	L	S	S	L	P	L	A	I	D	Y	E	V	L	F	S
Query Conservation
Alig confidence																																																																								.	.	.
Template Conservation																																																																								.	.	.
Template Sequence		K	I	R	V	A	H	T	P	D	A	D	D	A	F	X	F	Y	A	X	T	H	G	K	V	D	T	W	L	E	I	E	H	V	I	E	D	I	E	T	L	N	R	K	A	F	N	A	E	Y	E	V	T	A	I	S	A	H	A	Y	A	L	L	D	D	K	Y	R	I	L	S	.	.	.	A	G	A	S	V	G	D
Template Known Secondary structure									S	S												T	T		S			S																	G	G	G	T			S										T	T	S	T	T	T					S	.	.	.	S						S
Template Predicted Secondary structure																																																																								.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.				.	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	P	C	V	W	L	R	K	D	H	P	A	L	H	Q	T	W	N	L	D	T	F	L	R	Y	P	H	I	S	I	C	W	E	Q	S	D	T	W	A	L	D	N	V	L	Q	E	L	G	R	E	R	T	I	A	M	S	L	P	E	F	E	Q	S	L	F	M	A	A	Q	P	D	N	L	L	L	A	T	A	P
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.
Template Sequence		G	Y	G	P	V	V	V	A	K	.	.	.	.	.	.	.	.	.	S	E	I	S	L	D	G	K	R	I	A	V	P	G	R	Y	T	T	A	N	L	L	L	K	L	A	V	E	.	.	.	.	.	.	D	F	E	P	V	E	X	P	F	D	R	I	I	Q	A	V	L	D	E	E	V	D	A	G	L	L	I	H
Template Known Secondary structure		S								S	.	.	.	.	.	.	.	.	.	S					T	T						S		T	T	S											S	.	.	.	.	.	.	S								G	G	G							T	T	S	S	S						S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.										.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.							.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	C	Q	Y	Y	N	Q	L	H	Q	L	P	L	V	A	L	P	L	P	F	D	E	S	Q	Q	K	K	L	E	V	P	F	T	L	L	W	H	K	R	N	S	H	N	P	K	I	V	W	L	R	E	T	I	K	N	L	Y	A
Query Conservation
Alig confidence																																						.	.
Template Conservation																																						.	.
Template Sequence		E	G	Q	I	T	Y	A	D	Y	G	L	K	C	V	L	D	L	W	D	W	W	S	E	Q	V	K	L	P	L	P	L	G	L	N	A	I	.	.	R	R	D	L	S	V	E	V	Q	E	E	F	L	R	A	X	R	E	S	I	A
Template Known Secondary structure		G	G	G	G	T	G	G	G	G	T													T	T		S	S										.	.		T	T	S
Template Predicted Secondary structure																																						.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions