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Job DescriptionP31463
Confidence79.30%DateThu Jan 5 11:47:52 GMT 2012
Rank255Aligned Residues213
% Identity9%Templatec3un6A_
PDB info PDB header:unknown functionChain: A: PDB Molecule:hypothetical protein saouhsc_00137; PDBTitle: 2.0 angstrom crystal structure of ligand binding component of abc-type2 import system from staphylococcus aureus with zinc bound
Resolution2.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   96...100.........110..... ....120.........130.........140.........150.........160.........170..
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Query Sequence  GLKFELAAESPLMMIMLNAL. . . SKQIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSRELLSSLPLAIDY
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Template Sequence  QQVIKIGYLPITHSANLXXTKKLLSQYNHPKYKLELVKFNNWPDLXDALNSGRIDGAST. . . . . . LIELAXKSKQKGSNI
Template Known Secondary structure 


SSGGGTSSS
SS
SSTTSSS......TT


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   34.....40.........50.........60.........70.........80.........90.. .......100.......
 
   173......180.........190.........200.........210.........220.........230...... ...240.........250.
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Query Sequence  EVLFSDVPCVWLRKDHPALHQTWNLDTFLRYPHISICWEQSDTWALDNVLQELGRERTIAMSLP. EFEQSLFMAAQPDNL
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Template Sequence  KAVALGHHEGNVIXGQKGXHLNEFNNNGDDYHFGIPHRYSTHYLLLEELRKQLKIKPGHFSYHEXSPAEXPAALSEHRIT
Template Known Secondary structure  S

STT

GGG

SSSS
S
SSSTT

TTS

GGGTTS
S
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   108.110.........120.........130.........140.........150.........160.........170.........180.......
 
   252.......260.........270.........280.........290........ .300.........310.........
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Query Sequence  LLATAPRYCQYYNQLHQLPLVALPLPFDESQQKKLEVPFTLLWHKRN. . SHNPKIVWLRETIKNLYASMA
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Template Sequence  GYSVAEPFGALGEKLGKGKTLKHGD. . . . . DVIPDAYCCVLVLRGELLDQHKDVAQAFVQDYKKSGFKXN
Template Known Secondary structure  TTSS

GG.....GTSTT




TT
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   188.190.........200.........210.. .......220.........230.........240.........250..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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