Job Description P31463 Confidence 73.52% Date Thu Jan 5 11:47:52 GMT 2012 Rank 288 Aligned Residues 147 % Identity 7% Template c3tmgA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:glycine betaine, l-proline abc transporter, PDBTitle: crystal structure of glycine betaine, l-proline abc transporter,2 glycine/betaine/l-proline-binding protein (prox) from borrelia3 burgdorferi Resolution 1.90 Å

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	E	L	A	A	E	S	P	L	M	M	I	M	L	N	A	L	S	K	Q	I	Y	Q	R	Y	P	Q	A	T	I	K	L	R	N	W	D	Y	D	S	L	D	A	I	T	R	G	E	V	D	I	G	F	S	G	R	E	S	H	P	R	S	R	E	L	L	S	S	L	P	L	A	I	D	Y	E	V	L	F	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	K	I	G	Y	V	N	W	G	G	E	T	A	A	T	N	V	L	K	V	V	F	E	K	M	G	Y	N	A	E	I	F	S	V	T	T	S	I	M	Y	Q	Y	L	A	S	G	K	I	D	G	T	V	S	S	W	V	P	T	A	D	K	F	Y	Y	E	K	L	K	T	K	F	V	D	L	G	A	N	Y	E
Template Known Secondary structure																											T	T																			T	T	S	S	S								T	T	T	T								G	G	G
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.							.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.
Query Sequence		D	V	P	C	V	W	L	R	K	D	H	P	A	L	H	Q	T	W	N	L	D	T	F	L	R	Y	.	.	.	.	.	.	P	H	I	S	I	C	W	E	Q	S	D	T	W	A	L	D	N	V	L	Q	E	L	G	R	E	R	T	I	A	M	S	L	P	E	F	E	Q	S	L	F	M	A	A	Q
Query Conservation																												.	.	.	.	.	.
Alig confidence														.	.	.												.	.	.	.	.	.
Template Conservation														.	.	.
Template Sequence		G	T	I	Q	G	F	V	V	P	S	Y	V	.	.	.	P	I	S	S	I	S	E	L	K	G	K	G	D	K	F	K	N	K	M	I	G	I	D	A	G	A	G	T	Q	I	V	T	E	Q	A	L	N	Y	Y	G	L	S	K	E	Y	E	L	V	P	S	S	E	S	V	M	L	A	S	L	D	S
Template Known Secondary structure											T	T	S	.	.	.				B	G	G	G	G	T	T		G	G	G	G	T	T						S	T	T														T	T		T	T	T	S
Template Predicted Secondary structure														.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.				.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions