Job Description P31463 Confidence 99.55% Date Thu Jan 5 11:47:52 GMT 2012 Rank 34 Aligned Residues 197 % Identity 13% Template c3hhfB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:transcriptional regulator, lysr family; PDBTitle: structure of crga regulatory domain, a lysr-type transcriptional2 regulator from neisseria meningitidis. Resolution 2.30 Å

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		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	K	F	E	L	A	A	E	S	P	L	M	M	I	M	L	N	A	L	S	K	Q	I	Y	Q	R	Y	P	Q	A	T	I	K	L	R	N	W	D	Y	D	S	L	D	A	I	T	R	G	E	V	D	I	G	F	S	G	R	E	S	H	P	R	S	R	E	L	L	S	S	L	P	L	A	I	D	Y	E	V	L
Query Conservation
Alig confidence																																												.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	G	V	L	S	V	D	S	A	X	P	X	V	L	H	L	L	A	P	L	A	A	K	F	N	E	R	Y	P	H	I	R	L	S	L	V	S	S	E	G	Y	I	.	.	N	L	I	E	R	K	V	D	I	A	L	R	A	G	D	D	S	G	L	R	.	.	.	.	.	.	.	.	.	.	.	.	A	R	H	L
Template Known Secondary structure																	T													T	T									S	T	T		.	.				T	T	S	S	S									S	S			.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																												.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.													.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		F	S	D	V	P	C	V	W	L	R	K	D	H	P	A	L	H	Q	T	.	W	N	L	D	T	F	L	R	Y	P	H	I	S	I	C	W	E	Q	S	D	T	W	A	L	D	N	V	L	Q	E	L	G	R	E	R	T	I	A	M	S	L	P	E	F	E	Q	S	L	F	M	A	A	Q	P	D	N	L	L	L	A
Query Conservation																					.
Alig confidence																					.																																																						.	.
Template Conservation																																																																											.	.
Template Sequence		F	D	S	R	F	R	V	I	A	S	P	E	Y	L	A	K	H	G	T	P	Q	S	T	E	E	L	A	G	H	Q	C	L	G	F	T	E	P	G	S	L	N	T	W	A	V	L	D	A	Q	G	N	P	Y	K	I	S	P	H	F	T	A	S	S	G	E	I	L	R	S	L	C	L	S	.	.	G	C	G	I	V
Template Known Secondary structure																						S	S	G	G	G	G	G	G	S		B				S	S		G	G	G	G							T	T	S								S	S			S	S										T	.	.	T	S		B
Template Predicted Secondary structure																																																																											.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.			.	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	P	R	Y	C	Q	Y	Y	N	Q	L	H	Q	L	P	L	V	A	L	P	L	P	F	D	E	S	Q	Q	K	K	L	E	V	P	F	T	L	L	W	H	K	R	N	S	H	N	P	K	I	V	W	L	R	E	T	I	K	N
Query Conservation
Alig confidence																								.	.	.	.	.
Template Conservation																								.	.	.	.	.
Template Sequence		C	L	S	D	F	L	V	D	N	D	I	A	E	G	K	L	I	P	L	L	A	E	.	.	.	.	.	Q	T	S	D	K	T	H	P	F	N	A	V	Y	Y	S	D	K	A	V	N	L	R	L	R	V	F	L	D	F	L	V	E
Template Known Secondary structure															T	S	S					T	T	.	.	.	.	.	T	B													G	G	G	G	G
Template Predicted Secondary structure																								.	.	.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.						260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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