Return to main results Retrieve Phyre Job Id

Job DescriptionP31463
Confidence92.45%DateThu Jan 5 11:47:52 GMT 2012
Rank186Aligned Residues33
% Identity15%Templatec3e7lD_
PDB info PDB header:transcription regulatorChain: D: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigma54 activator ntrc4's dna binding2 domain
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.. .......30.........40......
Predicted Secondary structure  ..




Query SS confidence 








. .























Query Sequence  LCLQLLMQE. . RSVTKAAKRINVTPSAVSKSLAKL
Query Conservation    
  
   ..

 
 

  
 


 


  
  
Alig confidence 








..























Template Conservation    
  

    

   

  


 
 

  



 
Template Sequence  IFIEEKLREYDYDLKRTAEEIGIDLSNLYRKIKSL
Template Known Secondary structure  TTT
TT

T
Template Predicted Secondary structure 





Template SS confidence 


































   38.40.........50.........60.........70..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions