Job Description P31463 Confidence 80.57% Date Thu Jan 5 11:47:52 GMT 2012 Rank 247 Aligned Residues 91 % Identity 10% Template c2xroE_ PDB info PDB header:dna-binding protein/dna Chain: E: PDB Molecule:hth-type transcriptional regulator ttgv; PDBTitle: crystal structure of ttgv in complex with its dna operator Resolution 3.40 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure															.	.	.																																																						.
Query SS confidence															.	.	.																																																						.
Query Sequence		N	L	L	L	C	L	Q	L	L	M	Q	E	R	.	.	.	S	V	T	K	A	A	K	R	I	N	V	T	P	S	A	V	S	K	S	L	A	K	L	R	A	W	F	D	D	P	L	F	V	N	S	P	L	G	L	S	P	T	P	L	M	V	S	M	E	Q	N	L	A	.	E	W	M	Q	M	S	N	L	L	L
Query Conservation															.	.	.																																																						.
Alig confidence															.	.	.																								.																														.
Template Conservation																																									.
Template Sequence		R	A	A	S	I	M	R	A	L	G	S	H	P	H	G	L	S	L	A	A	I	A	Q	L	V	G	L	P	R	S	T	V	Q	R	I	I	N	A	L	.	E	E	E	F	L	V	E	A	L	G	P	A	G	G	F	R	L	G	P	A	L	G	Q	L	I	N	Q	A	Q	T	D	I	L	S	L	V	K	P	Y	L
Template Known Secondary structure														T	T		B									S	S														.		T	T	T	S					S	S	S	S						T								T	T	T	T	T
Template Predicted Secondary structure																																									.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	P	H	H	Q	T	P	R	G	L	K	F	E	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	S	L	A	E	E	L	D	E	S	V	S	L	A	S	L
Template Known Secondary structure								S		S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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