Job Description P31463 Confidence 99.71% Date Thu Jan 5 11:47:52 GMT 2012 Rank 20 Aligned Residues 200 % Identity 17% Template c2ql3G_ PDB info PDB header:transcription Chain: G: PDB Molecule:probable transcriptional regulator, lysr family protein; PDBTitle: crystal structure of the c-terminal domain of a probable lysr family2 transcriptional regulator from rhodococcus sp. rha1 Resolution 2.05 Å

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		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		G	L	K	F	E	L	A	A	E	S	P	L	M	M	I	M	L	N	A	L	S	K	Q	I	Y	Q	R	Y	P	Q	A	T	I	K	L	R	N	.	W	D	Y	D	S	L	D	A	I	T	R	G	E	V	D	I	G	F	S	G	R	E	S	H	P	R	S	R	E	L	L	S	S	L	P	L	A	I	D	Y	E	V
Query Conservation																																							.
Alig confidence																																							.																														.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	P	I	A	V	G	C	Y	P	A	L	G	P	T	I	L	P	S	X	L	Y	A	F	T	A	E	Y	P	R	A	S	V	E	F	R	E	D	T	Q	N	R	L	R	T	Q	L	E	G	G	E	L	D	V	A	I	V	Y	D	L	D	L	S	P	E	W	Q	.	.	.	.	.	.	.	.	.	.	T	V	P
Template Known Secondary structure											G	G	G	T	T	T	T													T	T																				T	S		S						S	S	S			S	S			.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.											.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		L	F	S	D	V	P	C	V	W	L	R	K	D	H	P	A	L	H	Q	T	.	.	W	N	L	D	T	F	L	R	Y	P	H	I	S	I	C	W	E	Q	S	D	T	W	A	L	D	N	V	L	Q	E	L	G	R	E	R	T	I	A	M	S	L	P	E	F	E	Q	S	L	F	M	A	A	Q	P	D	N	L	L
Query Conservation																						.	.
Alig confidence																						.	.																			.
Template Conservation																																										.
Template Sequence		L	X	T	R	E	P	X	V	V	L	G	A	E	H	P	L	A	G	V	D	G	P	V	R	L	A	D	L	A	E	H	P	X	V	L	L	D	A	P	P	.	S	T	N	H	A	X	D	V	C	R	E	A	G	F	A	P	R	V	A	Y	R	T	A	N	F	E	T	A	R	A	F	V	G	R	G	L	G	W	T
Template Known Secondary structure													T	T	S	T	T	T	T	S		S		B		G	G	G	G	T	T	S								T	T	.												T	T										S												T	S		B
Template Predicted Secondary structure																																										.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	T	A	P	R	Y	C	Q	Y	Y	N	Q	L	H	Q	L	P	L	V	A	L	P	L	P	F	D	E	S	Q	Q	K	K	L	E	V	P	F	T	L	L	W	H	K	R	N	S	H	N	P	K	I	V	W	L	R	E	T	I	K
Query Conservation
Alig confidence						.	.																			.	.	.	.
Template Conservation						.	.																			.	.	.	.
Template Sequence		L	L	L	Q	.	.	R	P	R	V	D	V	T	Y	E	G	L	P	V	V	V	K	P	I	.	.	.	.	A	E	P	K	P	A	S	V	A	V	V	V	A	W	H	Q	E	A	T	L	S	R	V	A	R	A	F	I	R	F	V	T
Template Known Secondary structure				S		.	.			S	S		B		T	T	S		B						B	.	.	.	.		S	S													T	T															T
Template Predicted Secondary structure						.	.																			.	.	.	.
Template SS confidence
		249	250	.	.			.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270					.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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