Job Description P31463 Confidence 84.23% Date Thu Jan 5 11:47:52 GMT 2012 Rank 227 Aligned Residues 87 % Identity 15% Template c2ia2D_ PDB info PDB header:transcription Chain: D: PDB Molecule:putative transcriptional regulator; PDBTitle: the crystal structure of a putative transcriptional regulator rha061952 from rhodococcus sp. rha1 Resolution 2.10 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		N	L	L	L	C	L	Q	L	L	M	Q	E	R	.	.	.	S	V	T	K	A	A	K	R	I	N	V	T	P	S	A	V	S	K	S	L	A	K	L	R	A	W	F	D	D	P	L	F	V	N	S	P	L	G	L	S	P	T	P	L	M	V	S	M	E	Q	N	L	A	E	W	M	Q	M	S	N	L	L	L	D
Query Conservation															.	.	.
Alig confidence															.	.	.																											.	.	.																			.
Template Conservation																																												.	.	.																			.
Template Sequence		R	G	L	A	V	I	R	C	F	D	H	R	N	Q	R	R	T	L	S	D	V	A	R	A	T	D	L	T	R	A	T	A	R	R	F	L	L	T	L	V	E	L	.	.	.	G	Y	V	A	A	F	W	L	T	P	R	V	L	E	L	G	Y	S	.	Y	L	S	S	L	S	L	P	E	V	A	Q	P	H	L	E
Template Known Secondary structure									T			S	S														T																T	.	.	.	T	S	B					B		G	G	G							.					S	S
Template Predicted Secondary structure																																												.	.	.																			.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.				.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	H	H	Q	T	P	R	G	L	K	F	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	S	H	K	V	H	E	S	S	S	V	S	I
Template Known Secondary structure									S
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions