Job Description P31463 Confidence 92.88% Date Thu Jan 5 11:47:52 GMT 2012 Rank 182 Aligned Residues 53 % Identity 17% Template c1h0mD_ PDB info PDB header:transcription/dna Chain: D: PDB Molecule:transcriptional activator protein trar; PDBTitle: three-dimensional structure of the quorum sensing protein2 trar bound to its autoinducer and to its target dna Resolution 3.0 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	K	S	I	T	T	L	D	L	N	L	L	L	C	L	Q	L	L	M	Q	E	R	S	V	T	K	A	A	K	R	I	N	V	T	P	S	A	V	S	K	S	L	A	K	L	R	A	W	F	D	D	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	E	D	A	A	W	L	D	P	K	E	A	T	Y	L	R	W	I	A	V	G	K	T	X	E	E	I	A	D	V	E	G	V	K	Y	N	S	V	R	V	K	L	R	E	A	X	K	R	F	D	V	R
Template Known Secondary structure		S		B																	T	T	T										T	T																		T		S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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