Job Description P0AE26 Confidence 97.15% Date Thu Jan 5 11:22:21 GMT 2012 Rank 2 Aligned Residues 285 % Identity 13% Template d1l7va_ SCOP info ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC ABC transporter involved in vitamin B12 uptake, BtuC Resolution 3.20

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.								.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.																															.					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.																															.					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	R	I	W	D	Q	Y	G	M	L	V	V	F	A	V	L	F	I	A	C	A	I	F	V	P	.	.	.	.	.	.	.	N	F	A	T	F	I	N	M	K	G	L	G	L	A	I	S	M	S	G	M	V	A	C	G	M	L	F	C	L	A	.	S	G	D	F	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																											.	.	.	.	.	.	.																															.					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.																															.					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	Q	N	I	R	W	L	L	C	L	S	V	L	X	L	L	A	L	L	L	S	L	C	A	G	E	Q	W	I	S	P	G	D	W	F	T	P	R	G	E	L	F	V	W	Q	I	R	L	P	R	T	L	A	V	L	L	V	G	A	A	L	A	I	S	G	A	V	X	Q	A	L	F	E	N	P	L	A	E	P	G
Template Known Secondary structure																									B	S	S	S	B			S	G	G	G	S	S	T	T	T	T	T					T																											T		T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		D	L	S	V	A	S	V	I	A	C	A	G	V	T	T	A	V	V	I	N	L	T	E	S	L	W	I	G	V	A	A	G	L	L	L	G	V	L	C	G	L	V	N	G	F	V	I	A	K	L	K	I	N	A	L	.	.	I	T	T	L	A	T	M	Q	I	V	R	G	L	A	Y	I	I	S	D	G	K	A	V
Query Conservation																																																									.	.
Alig confidence																																																									.	.
Template Conservation
Template Sequence		L	L	G	V	S	N	G	A	G	V	G	L	I	A	A	V	L	L	G	Q	G	Q	L	P	N	W	A	L	G	L	C	A	I	A	G	A	L	I	I	T	L	I	L	L	R	F	A	R	R	H	L	S	T	S	R	L	L	L	A	G	V	A	L	G	I	I	C	S	A	L	X	T	W	A	I	Y	F	S	T	S
Template Known Secondary structure		T	T	T															T	S		T	T																												T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	E	D	E	S	F	F	A	L	G	Y	A	N	W	F	G	L	P	A	P	I	W	L	T	V	A	C	L	I	I	F	G	L	L	L	N	K	T	T	F	G	R	N	T	L	A	I	G	G	N	E	E	A	A	R	L	A	G	V	P	V	V	R	T	K	I	I	I	F	V	L	S	G	L	V	S	A	I	A
Query Conservation
Alig confidence																																											.	.	.
Template Conservation																																											.	.	.
Template Sequence		V	D	L	R	Q	L	X	Y	W	X	X	G	G	F	G	G	V	D	W	R	Q	S	W	L	X	L	A	L	I	P	V	L	L	W	I	C	C	Q	S	R	P	.	.	.	X	N	X	L	A	L	G	E	I	S	A	R	Q	L	G	L	P	L	W	F	W	R	N	V	L	V	A	A	T	G	W	X	V	G	V	S
Template Known Secondary structure												T				T	T			G	G	G																					.	.	.														T	T
Template Predicted Secondary structure																																											.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210				.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		236	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.					.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.																																																									.	.	.	.
Query SS confidence							.	.																																																									.	.	.	.
Query Sequence		G	I	I	L	A	.	.	S	R	M	T	S	G	Q	P	M	T	S	I	G	Y	E	L	I	V	I	S	A	C	V	L	G	G	V	S	L	K	G	G	I	G	K	I	S	Y	V	V	A	G	I	L	I	L	G	T	V	E	N	A	M	N	L	L	.	.	.	.	N	I	S	P	F	A	Q	Y	V	V	R	G	L
Query Conservation							.	.																																																									.	.	.	.
Alig confidence							.	.																									.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	L	A	G	A	I	G	F	I	G	L	V	I	P	H	I	L	R	L	C	G	L	T	D	H	R	V	L	L	P	.	.	.	.	.	.	.	.	.	.	.	.	G	C	A	L	A	G	A	S	A	L	L	L	A	D	I	V	A	R	L	A	L	A	A	A	E	L	P	I	G	V	V	T	A	T	L	G	A
Template Known Secondary structure										S	S	S	S									T	T			S							.	.	.	.	.	.	.	.	.	.	.	.																				S		S	S	S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.													.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	L	A	A	V	I	F	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	F	I	W	L	L	L	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions