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Job DescriptionP0A698
Confidence99.19%DateThu Jan 5 11:02:38 GMT 2012
Rank70Aligned Residues188
% Identity18%Templatec3a4mB_
PDB info PDB header:transferaseChain: B: PDB Molecule:l-seryl-trna(sec) kinase; PDBTitle: crystal structure of archaeal o-phosphoseryl-trna(sec)2 kinase
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   635....640.........650.........660.........670.........680.........690.........700.........710....
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Query Sequence  FTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVREL
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Template Sequence  LIILTGLPGVGKSTFSK. . NLAKILSKNNIDVIVLGSDLIRESFPVWKEKYEEFIKKSTYRLIDSALKNYWVIVDDTNYY
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   6...10.........20.. .......30.........40.........50.........60.........70.........80...
 
   715....720.........730.........740.........750.........760.........770.........780.........790....
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Query Sequence  FAGVPESRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIE
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Template Sequence  NS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   84.
 
   795....800.........810......... 820.........830....... ..840.........850.........860...
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Query Sequence  EAREFFDAVPALARKLQTLMDVGLT. . YIRLGQSATTLSGGEAQR. . . . . . . . . VKLARELSKRGTGQTLYILDEPTTGL
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Template Sequence  . . . . . . . . . . MRRDLINIAKKYNKNYAIIYLKASLDVLIRRNIERGEKIPNEVIKKMYEKFDEPGK. . . KYKWDEPFLII
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   86...90.........100.........110.........120.........130.........140. ........150..
 
   864.....870.........880.........890..... ....900.. .......910.........920..
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Query Sequence  HFADIQQLLDVLHKLRDQGNTIVVIEHNLDVI. KTADWIV. . DLGPEGGSGGGEILVSGTPE
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Template Sequence  DTTKDIDFNEIAKKLIEKS. KEIPKFNISDKIDKETRKIVSEYI. . . . . . KSKKLDKDKIKE
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   153......160.........170. ........180.........190..... ....200.......
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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