Job Description P0A698 Confidence 100.00% Date Thu Jan 5 11:02:38 GMT 2012 Rank 7 Aligned Residues 425 % Identity 16% Template c2iw3B_ PDB info PDB header:translation Chain: B: PDB Molecule:elongation factor 3a; PDBTitle: elongation factor 3 in complex with adp Resolution 2.4 Å

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		468	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	L	V	N	V	G	L	N	Y	L	T	L	S	R	S	A	E	T	L	S	G	G	E	A	Q	R	I	R	L	A	S	Q	I	G	A	G	L	V	G	V	M	Y	V	L	D	E	P	S	I	G	L	H	Q	R	D	N	E	R	L	L	G	T	L	I	H	L	R	D	L	G	N	T	V	I	V	V	E	H	D
Query Conservation
Alig confidence																																									.	.																											.	.	.
Template Conservation																																									.	.																											.	.	.
Template Sequence		D	K	L	I	E	F	G	F	T	D	E	X	I	A	X	P	I	S	A	L	S	G	G	W	K	X	K	L	A	L	A	R	A	V	L	R	N	A	D	.	.	I	L	L	L	D	E	P	T	N	H	L	D	T	V	N	V	A	W	L	V	N	Y	L	N	T	C	.	.	.	G	I	T	S	I	T	I	S	H	D
Template Known Secondary structure								T								S	B	G	G	G																	T	T		S	.	.						S	T	T	T	T																S	.	.	.		S							S
Template Predicted Secondary structure																																									.	.																											.	.	.
Template SS confidence
		524	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.			.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.				.	590	.	.	.	.	.	.	.	.
		548	.	550	.		.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.														.	.	.	.	.	610	.	.	.
Predicted Secondary structure						.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	D	A	I	.	R	A	A	D	H	V	I	D	I	G	P	G	A	G	V	H	G	G	E	V	V	A	E	G	P	L	E	A	I	M	A	V	P	E	S	L	T	G	Q	Y	M	S	G	K	R	K	I	E	V	P	K	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	A	N	P	E	K	V	L
Query Conservation						.																																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.																	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.
Template Sequence		S	V	F	L	D	N	V	C	E	Y	I	I	N	Y	E	G	L	K	L	R	K	.	.	.	.	.	Y	K	G	N	F	T	E	F	V	K	K	C	P	A	A	K	A	Y	E	E	L	S	N	T	D	L	E	F	K	F	P	E	P	G	Y	L	E	G	V	K	T	K	Q	K	A	I	V	K	V	T	N	X	E	F
Template Known Secondary structure										S							T	T					.	.	.	.	.			S										G	G	G	G	G	T	T		S	S	G	G	G	G											T	T			S	T	T	S		S
Template Predicted Secondary structure																							.	.	.	.	.
Template SS confidence
		599	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.						620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.
		614	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		K	L	T	G	A	R	G	N	N	L	K	D	V	T	L	T	L	P	V	G	L	F	T	C	I	T	G	V	S	G	S	G	K	S	T	L	I	N	D	T	L	F	P	I	A	Q	R	Q	L	N	G	A	T	I	A	E	P	A	P	Y	R	D	I	Q	G	L	E	H	F	D	K	V	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence																																								.	.																																	.	.	.	.	.	.	.	.
Template Conservation																																								.	.
Template Sequence		Q	Y	P	G	T	S	K	P	Q	I	T	D	I	N	F	Q	C	S	L	S	S	R	I	A	V	I	G	P	N	G	A	G	K	S	T	L	I	N	.	.	V	L	T	G	E	L	L	P	T	S	G	E	V	Y	T	H	E	N	C	R	I	A	Y	I	K	Q	H	A	F	A	H	I	E	S	H	L	D	K	T	P
Template Known Secondary structure				T	T		S	S		S										T	T							S	S											.	.			T	T	S	S			S								T	T														G	G	G		T	T	S
Template Predicted Secondary structure																																								.	.
Template SS confidence
		674	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.			.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.
				686	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	I	D	I	D	Q	S	P	I	G	R	T	P	R	S	N	P	A	T	Y	T	G	V	F	T	P	V	R	E	L	F	A	G	V	P	E	S	R	A	R	G	Y	T	P	G	R	F	S	F	N	V	R	G	G	R	C	E	A	C	Q	G	D	G	V	I	K	V	E	M	H	F	L	P	D	I	Y	V	P	C
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		S	E	Y	I	Q	W	R	F	Q	T	G	E	D	R	E	T	X	D	R	A	N	R	Q	I	N	E	N	D	A	E	A	X	N	K	I	F	K	I	E	G	T	P	R	R	I	A	G	I	H	S	R	R	K	F	K	N	T	Y	E	Y	E	C	S	F	L	L	G	E	N	I	G	X	K	S	E	R	W	V	P	X
Template Known Secondary structure									T	T	T	S	S		T	T	T	T	T	T	T	S					S	S		S	S	S	T	T						T	T															T	T													S	S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		752	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.
		764	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.		.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		D	Q	C	K	G	K	R	Y	N	R	E	T	L	E	I	K	Y	K	G	K	T	I	H	E	V	L	D	M	T	I	E	E	A	R	E	F	F	D	A	V	P	A	L	A	R	K	L	Q	T	L	M	D	V	G	L	T	Y	I	R	.	L	G	Q	S	A	T	T	L	S	G	G	E	A	Q	R	V	K	L	A	R
Query Conservation																																																													.
Alig confidence																												.	.	.																															.
Template Conservation																												.	.	.
Template Sequence		X	S	V	D	N	A	W	I	P	R	G	E	L	V	E	S	H	S	K	X	V	A	E	V	D	X	.	.	.	K	E	A	L	A	S	G	Q	F	R	P	L	T	R	K	E	I	E	E	H	C	S	X	L	G	L	D	P	E	I	V	S	H	S	R	I	R	G	L	S	G	G	Q	K	V	K	L	V	L	A	A
Template Known Secondary structure			G	G	G						G	G	G	T														.	.	.						T	T																	T	T									S		G	G	G	S
Template Predicted Secondary structure																												.	.	.
Template SS confidence
		832	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.				.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.
		843	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.		.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		E	L	S	K	R	G	T	G	Q	T	L	Y	I	L	D	E	P	T	T	G	L	H	F	A	D	I	Q	Q	L	L	D	V	L	H	K	L	R	D	Q	G	N	T	I	V	V	I	E	H	N	L	D	V	I	K	T	.	A	D	W	I	V	D	L	G	P	E	G	G	S	G	G	G	E	I	L	V	S	G
Query Conservation																																																									.
Alig confidence									.	.	.																											.	.	.																	.								.	.	.	.	.	.
Template Conservation									.	.	.																											.	.	.																									.	.	.	.	.	.
Template Sequence		G	T	W	Q	R	P	H	.	.	.	L	I	V	L	D	E	P	T	N	Y	L	D	R	D	S	L	G	A	L	S	K	A	L	K	E	F	.	.	.	E	G	G	V	I	I	I	T	H	S	A	E	F	T	K	N	L	T	E	E	V	W	A	V	.	.	.	.	.	.	K	D	G	R	X	T	P	S	G
Template Known Secondary structure			T	T	T			S	.	.	.							G	G	G	T																	.	.	.	S	S							S						T	T	T								.	.	.	.	.	.	B	T	T	B
Template Predicted Secondary structure									.	.	.																											.	.	.																									.	.	.	.	.	.
Template SS confidence
		909	910	.	.	.	.	.				.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.				.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.							.	.	.	.	970	.	.	.	.