Job Description P45468 Confidence 2.15% Date Thu Jan 5 12:02:44 GMT 2012 Rank 77 Aligned Residues 218 % Identity 10% Template c3c02A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:aquaglyceroporin; PDBTitle: x-ray structure of the aquaglyceroporin from plasmodium falciparum Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.													.	.	.	.	.	160	.	.	.	.	.	.	.			.	.	170	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.														.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.														.	.
Query Sequence		F	R	G	T	L	L	G	T	L	F	S	L	P	G	M	M	C	T	C	C	A	A	P	V	A	A	G	M	R	R	Q	Q	V	S	M	G	G	A	L	A	F	W	M	G	N	P	.	.	.	.	.	.	.	.	.	.	.	.	V	L	N	P	A	T	L	V	F	M	G	F	V	.	.	L	G	W	G	F	A	A
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.														.	.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation
Template Sequence		V	R	E	F	I	G	E	F	L	G	T	F	V	L	M	F	L	G	E	G	A	T	A	N	F	H	T	T	G	L	S	G	D	W	Y	K	L	C	L	G	W	G	L	A	V	F	F	G	I	L	V	S	A	K	L	S	G	A	H	L	N	L	A	V	S	I	G	L	S	S	I	N	K	F	D	L	K	K	I	P
Template Known Secondary structure																													S	S	S	T	T																													S										T	T	S	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	L	V	A	G	L	V	M	V	L	L	I	A	T	L	V	Q	K	W	V	R	E	T	P	Q	T	Q	A	P	V	E	I	D	I	P	E	A	Q	G	G	F	F	S	R	W	G	R	A	L	W	T	L	F	W	S	T	I	P	V	Y	I	L	A	V	L	V	L	G	A	A	R	V	W	L	F	P	H	A	D
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	Y	F	F	A	Q	L	L	G	A	F	V	G	T	S	T	V	Y	G	L	Y	H	G	F	I	S	N	S	K	I	P	Q	F	A	W	E	T	S	R	N	P	S	.	.	.	.	.	.	.	.	.	.	.	.	I	S	L	T	G	A	F	F	N	E	L	I	L	T	G	I	L	L	L	V	I	L	V	V	V	D
Template Known Secondary structure																						T						T	T		S		T	T		S	S					T	T	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.													.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	V	D	N	S	L	M	W	V	V	A	M	A	V	A	G	C	L	F	V	I	P	T	A	A	E	I	P	I	V	Q	T	M	M	L	A	G	M	G	T	A	P	A	L	A	L	L	M	T	L	P	A	V	S	L	P	S	L	I	M	L	R	K	A	F	P	A	K	A	L	W	L	T	G	A	M	V	A	V
Query Conservation
Alig confidence																																																													.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.
Template Sequence		E	N	I	C	G	K	F	H	I	L	K	L	S	S	V	V	G	L	I	I	L	C	I	G	I	T	F	G	G	N	T	G	F	A	L	N	P	S	R	D	L	G	S	R	F	L	S	L	I	A	Y	G	K	D	T	F	T	K	D	.	.	.	.	.	.	.	.	N	F	Y	F	W	V	P	L	V	A	P	C	V
Template Known Secondary structure							S																																															T							.	.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.									.	.	.	220	.	.	.	.	.	.	.	.	.
		335	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	V	I	V	G	G	L	A	L	L	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	V	V	F	C	Q	F	Y	D	K	V
Template Known Secondary structure													T
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions