Return to main results Retrieve Phyre Job Id

Job DescriptionP45468
Confidence4.32%DateThu Jan 5 12:02:44 GMT 2012
Rank29Aligned Residues125
% Identity9%Templatec3b9yA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:ammonium transporter family rh-like protein; PDBTitle: crystal structure of the nitrosomonas europaea rh protein
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   107..110.........120.........130.........140.........150.........160.........170......... 180....
Predicted Secondary structure 










..
Query SS confidence 








































































. .




Query Sequence  SRFRGTLLGTLFSLPGMMCTCCAAPVAAGMRRQQVSMGGALAFWMGNPVLNPATLVFMGFVLGWGFAAIRLVA. . GLVMV
Query Conservation          


 
   
 


 



   
  



 
  







 


 

  
   

   

 
 
 ..


 
Alig confidence 








































































..




Template Conservation   
  
 


 


 
       
   
   
 


  

  


  

 
 
     
  
   

  
 

   
 
 
Template Sequence  GPVGAFVIGLLGGAISVVGFVFIQPMLESKAKTIDTCGVHNLHGLPGLLGGFSAILIVPGIAVAQLTGIGITLALALIGG
Template Known Secondary structure 
TS



TT
TTSTT
Template Predicted Secondary structure 










Template SS confidence 















































































   282.......290.........300.........310.........320.........330.........340.........350.........360.
 
   185....190.........200.........210 .........220.........230.
Predicted Secondary structure 















..



Query SS confidence 

























. .




















Query Sequence  LLIATLVQKWVRETPQTQAPVEIDIP. . EAQGGFFSRWGRALWTLFWST
Query Conservation 
  
 
                    ..                     
Alig confidence 

























..




















Template Conservation 

 
 


          
  
                           
Template Sequence  VIAGALIKLTGTTKQAYEDSHEFIHLAGPEDEHKAERLVLEAKTEIQGL
Template Known Secondary structure  TT


SSTT
GGGTSSS


GGGTT
Template Predicted Secondary structure 
































Template SS confidence 
















































   362.......370.........380.........390.........400.........410
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions