Job Description P45468 Confidence 3.69% Date Thu Jan 5 12:02:44 GMT 2012 Rank 35 Aligned Residues 126 % Identity 19% Template c2w2eA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:aquaporin; PDBTitle: 1.15 angstrom crystal structure of p.pastoris aquaporin,2 aqy1, in a closed conformation at ph 3.5 Resolution 1.15 Å

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		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	A	P	V	E	I	D	I	P	E	A	Q	G	G	F	F	S	R	W	G	R	A	L	W	T	L	F	W	S	T	I	P	V	Y	I	L	A	V	L	V	L	G	A	A	R	V	W	L	F	P	H	A	D	G	A	V	D	N	S	L	M	W	V	V	A	M	A	V	A	G	C	L	F	V	I	P	T	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	A	Y	K	P	A	Y	A	R	W	G	F	G	S	D	S	V	R	N	H	F	I	A	M	S	G	E	F	V	G	T	F	L	F	L	W	S	A	F	V	I	A	Q	I	A	N	Q	A	P	E	T	P	D	G	G	S	N	P	A	Q	L	I	M	I	S	F	G	F	G	F	G	V	M	V	G	V	F	I	T	Y
Template Known Secondary structure		S					G	G	G	G			T	T	T	T	S																														T	T	S				G	G	G																										T
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	P	I	V	Q	T	M	M	L	A	G	M	G	T	A	P	A	L	A	L	L	M	T	L	P	A	V	S	L	P	S	L	I	M	L	R	K	A	F	P	A	K	A	L	W	L	T	G	A	M	V	A	V	S	G	V	I	V	G	G	L	A	L	L
Query Conservation
Alig confidence		.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	R	V	S	G	G	N	L	N	P	A	V	T	L	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	A	R	A	I	P	P	F	R	G	I	L	M	A	F	T	Q	I	V	A	G	M	A	A	A	G	A	A	S	A
Template Known Secondary structure		.	.	.	.	.	.	T	T	T					S								.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	S	S
Template Predicted Secondary structure		.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
								105	.	.	.	.	110	.	.	.	.	.	.	.	.	.														120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions