 |
Job Description | P45468 | Confidence | 2.71% | Date | Thu Jan 5 12:02:44 GMT 2012 |
Rank | 54 | Aligned Residues | 38 |
% Identity | 11% | Template | c2dy3B_ |
PDB info |
PDB header:isomerase | Chain: B: PDB Molecule:alanine racemase; |
PDBTitle: crystal structure of alanine racemase from corynebacterium glutamicum
|
Resolution | 2.10 Å |
|
  |   |
98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | W | L | L | R | T | L | G | Q | S | R | F | R | G | T | L | L | G | T | L | F | S | L | P | G | M | M | C | T | C | C | A | A | P | V | A | A | G | M | R | R | Q | Q | V | S |
Query Conservation |   |
  |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |   |
|   |
|
|
|   |
|
|
|
|   |   |   |
|   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |
Template Sequence |   |
R | V | L | K | Q | M | A | G | P | A | K | L | M | A | V | V | K | A | N | A | Y | N | . |
. |
. |
. |
. |
. |
. |
H | G | V | E | K | V | A | P | V | I | A | A | H | G | A | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T | S |  |  |  |  |  |
|  |  |  |  |  | T | . | . | . | . | . | . | . | T |
|  |  |  |  |  |  |  |  |  | T | T | T |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|