Email l.a.kelley@imperial.ac.uk Description P77754 Date Thu Jan 5 12:32:31 GMT 2012 Unique Job ID 6dd5dda47af41be8

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3itfA_ 99.9 24 PDB header:signaling protein Chain: A: PDB Molecule:periplasmic adaptor protein cpxp; PDBTitle: structural basis for the inhibitory function of the cpxp adaptor2 protein 2 c3qzcA_ 99.8 28 PDB header:signaling protein Chain: A: PDB Molecule:periplasmic protein cpxp; PDBTitle: structure of the periplasmic stress response protein cpxp 3 c3o39A_ 99.8 93 PDB header:chaperone Chain: A: PDB Molecule:periplasmic protein related to spheroblast formation; PDBTitle: crystal structure of spy 4 c3epvB_ 99.8 12 PDB header:metal binding protein Chain: B: PDB Molecule:nickel and cobalt resistance protein cnrr; PDBTitle: x-ray structure of the metal-sensor cnrx in both the apo- and copper-2 bound forms 5 c3oeoD_ 99.8 99 PDB header:signaling protein Chain: D: PDB Molecule:spheroplast protein y; PDBTitle: the crystal structure e. coli spy 6 c3layF_ 98.6 15 PDB header:metal binding protein Chain: F: PDB Molecule:zinc resistance-associated protein; PDBTitle: alpha-helical barrel formed by the decamer of the zinc resistance-2 associated protein (stm4172) from salmonella enterica subsp. enterica3 serovar typhimurium str. lt2 7 c3g6iA_ 86.1 16 PDB header:unknown function Chain: A: PDB Molecule:putative outer membrane protein, part of carbohydrate PDBTitle: crystal structure of an outer membrane protein, part of a putative2 carbohydrate binding complex (bt_1022) from bacteroides3 thetaiotaomicron vpi-5482 at 1.93 a resolution 8 c2qguA_ 78.9 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:probable signal peptide protein; PDBTitle: three-dimensional structure of the phospholipid-binding protein from2 ralstonia solanacearum q8xv73_ralsq in complex with a phospholipid at3 the resolution 1.53 a. northeast structural genomics consortium4 target rsr89 9 d3cmna1 69.8 15 Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Caur0242-like 10 c2i9lL_ 59.5 40 PDB header:immune system/viral protein Chain: L: PDB Molecule:virion membrane protein m25; PDBTitle: structure of fab 7d11 from a neutralizing antibody against the2 poxvirus l1 protein 11 c2xv9A_ 52.9 13 PDB header:lipid binding protein Chain: A: PDB Molecule:aba-1a1 repeat unit; PDBTitle: the solution structure of aba-1a saturated with oleic acid 12 c3cmnA_ 48.7 15 PDB header:hydrolase Chain: A: PDB Molecule:putative hydrolase; PDBTitle: crystal structure of a putative hydrolase with a novel fold2 from chloroflexus aurantiacus 13 c2an7A_ 43.4 29 PDB header:dna binding protein Chain: A: PDB Molecule:protein pard; PDBTitle: solution structure of the bacterial antidote pard 14 c3ieeA_ 41.8 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative exported protein; PDBTitle: crystal structure of hypothetical protein bf3319 from bacteroides2 fragilis (yp_212931.1) from bacteroides fragilis nctc 9343 at 1.70 a3 resolution 15 c2amiA_ 33.9 25 PDB header:cell cycle Chain: A: PDB Molecule:caltractin; PDBTitle: solution structure of the calcium-loaded n-terminal sensor2 domain of centrin 16 c2dmxA_ 32.8 9 PDB header:chaperone Chain: A: PDB Molecule:dnaj homolog subfamily b member 8; PDBTitle: solution structure of the j domain of dnaj homolog2 subfamily b member 8 17 c3oopA_ 32.4 12 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lin2960 protein; PDBTitle: the structure of a protein with unknown function from listeria innocua2 clip11262 18 c2x5qA_ 24.9 35 PDB header:unknown function Chain: A: PDB Molecule:sso1986; PDBTitle: crystal structure of hypothetical protein sso1986 from2 sulfolobus solfataricus p2 19 d1q44a_ 23.7 7 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:PAPS sulfotransferase 20 d1pcfa_ 22.9 33 Fold:ssDNA-binding transcriptional regulator domain Superfamily:ssDNA-binding transcriptional regulator domain Family:Transcriptional coactivator PC4 C-terminal domain 21 d1eh1a_ not modelled 22.2 10 Fold:RRF/tRNA synthetase additional domain-like Superfamily:Ribosome recycling factor, RRF Family:Ribosome recycling factor, RRF 22 c1zd1B_ not modelled 22.2 14 PDB header:transferase Chain: B: PDB Molecule:sulfotransferase 4a1; PDBTitle: human sulfortransferase sult4a1 23 d1g3ma_ not modelled 22.1 23 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:PAPS sulfotransferase 24 d1wova1 not modelled 22.0 17 Fold:Heme oxygenase-like Superfamily:Heme oxygenase-like Family:Eukaryotic type heme oxygenase 25 d1akha_ not modelled 21.7 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 26 c2kz5A_ not modelled 21.5 15 PDB header:transcription Chain: A: PDB Molecule:transcription factor nf-e2 45 kda subunit; PDBTitle: solution nmr structure of transcription factor nf-e2 subunit's dna2 binding domain from homo sapiens, northeast structural genomics3 consortium target hr4653b 27 d1wh7a_ not modelled 20.9 24 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 28 c2crjA_ not modelled 20.9 15 PDB header:gene regulation Chain: A: PDB Molecule:swi/snf-related matrix-associated actin- PDBTitle: solution structure of the hmg domain of mouse hmg domain2 protein hmgx2 29 c2xsdC_ not modelled 20.7 11 PDB header:transcription/dna Chain: C: PDB Molecule:pou domain, class 3, transcription factor 1; PDBTitle: crystal structure of the dimeric oct-6 (pou3f1) pou domain2 bound to palindromic more dna 30 c2k5jB_ not modelled 19.8 9 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein yiif; PDBTitle: solution structure of protein yiif from shigella flexneri2 serotype 5b (strain 8401) . northeast structural genomics3 consortium target sft1 31 c2kqxA_ not modelled 19.4 10 PDB header:chaperone binding protein Chain: A: PDB Molecule:curved dna-binding protein; PDBTitle: nmr structure of the j-domain (residues 2-72) in the2 escherichia coli cbpa 32 d3d1kb1 not modelled 19.3 23 Fold:Globin-like Superfamily:Globin-like Family:Globins 33 c2ctoA_ not modelled 18.7 17 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:novel protein; PDBTitle: solution structure of the hmg box like domain from human2 hypothetical protein flj14904 34 c2eqzA_ not modelled 18.7 6 PDB header:transcription Chain: A: PDB Molecule:high mobility group protein b3; PDBTitle: solution structure of the first hmg-box domain from high2 mobility group protein b3 35 c3rh3A_ not modelled 18.5 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized duf3829-like protein; PDBTitle: crystal structure of an uncharacterized duf3829-like protein (bt_1908)2 from bacteroides thetaiotaomicron vpi-5482 at 2.10 a resolution 36 d1ek8a_ not modelled 18.3 9 Fold:RRF/tRNA synthetase additional domain-like Superfamily:Ribosome recycling factor, RRF Family:Ribosome recycling factor, RRF 37 d1is1a_ not modelled 18.3 10 Fold:RRF/tRNA synthetase additional domain-like Superfamily:Ribosome recycling factor, RRF Family:Ribosome recycling factor, RRF 38 d1i94m_ not modelled 17.9 15 Fold:S13-like H2TH domain Superfamily:S13-like H2TH domain Family:Ribosomal protein S13 39 d1j99a_ not modelled 17.8 23 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:PAPS sulfotransferase 40 c2k19A_ not modelled 17.8 22 PDB header:antimicrobial protein Chain: A: PDB Molecule:putative piscicolin 126 immunity protein; PDBTitle: nmr solution structure of pisi 41 d1jebb_ not modelled 17.3 38 Fold:Globin-like Superfamily:Globin-like Family:Globins 42 c2da4A_ not modelled 16.9 9 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein dkfzp686k21156; PDBTitle: solution structure of the homeobox domain of the2 hypothetical protein, dkfzp686k21156 43 c3fghA_ not modelled 16.7 13 PDB header:transcription Chain: A: PDB Molecule:transcription factor a, mitochondrial; PDBTitle: human mitochondrial transcription factor a box b 44 c2zvpX_ not modelled 16.4 23 PDB header:transferase Chain: X: PDB Molecule:tyrosine-ester sulfotransferase; PDBTitle: crystal structure of mouse cytosolic sulfotransferase msult1d1 complex2 with pap and p-nitrophenol 45 c3lf9A_ not modelled 16.0 9 PDB header:immune system Chain: A: PDB Molecule:4e10_d0_1is1a_001_c (t161); PDBTitle: crystal structure of hiv epitope-scaffold 4e10_d0_1is1a_001_c 46 c2h8kA_ not modelled 15.9 25 PDB header:transferase Chain: A: PDB Molecule:sult1c3 splice variant d; PDBTitle: human sulfotranferase sult1c3 in complex with pap 47 c3d1nK_ not modelled 15.8 22 PDB header:transcription regulator/dna Chain: K: PDB Molecule:pou domain, class 6, transcription factor 1; PDBTitle: structure of human brn-5 transcription factor in complex2 with corticotrophin-releasing hormone gene promoter 48 d2uubm1 not modelled 15.7 16 Fold:S13-like H2TH domain Superfamily:S13-like H2TH domain Family:Ribosomal protein S13 49 d1wqga1 not modelled 15.5 7 Fold:RRF/tRNA synthetase additional domain-like Superfamily:Ribosome recycling factor, RRF Family:Ribosome recycling factor, RRF 50 d1lwma_ not modelled 15.1 13 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 51 d2sasa_ not modelled 14.9 35 Fold:EF Hand-like Superfamily:EF-hand Family:Calmodulin-like 52 d1pq9a_ not modelled 14.9 14 Fold:Nuclear receptor ligand-binding domain Superfamily:Nuclear receptor ligand-binding domain Family:Nuclear receptor ligand-binding domain 53 c1o6uA_ not modelled 14.7 23 PDB header:transferase Chain: A: PDB Molecule:sec14-like protein 2; PDBTitle: the crystal structure of human supernatant protein factor 54 d1lvaa3 not modelled 14.4 18 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:C-terminal fragment of elongation factor SelB 55 d1v63a_ not modelled 14.3 12 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 56 d1dd5a_ not modelled 14.1 10 Fold:RRF/tRNA synthetase additional domain-like Superfamily:Ribosome recycling factor, RRF Family:Ribosome recycling factor, RRF 57 d1qpwb_ not modelled 13.9 15 Fold:Globin-like Superfamily:Globin-like Family:Globins 58 c1y698_ not modelled 13.7 7 PDB header:ribosome Chain: 8: PDB Molecule:ribosome recycling factor; PDBTitle: rrf domain i in complex with the 50s ribosomal subunit from2 deinococcus radiodurans 59 d1h8ba_ not modelled 13.7 14 Fold:EF Hand-like Superfamily:EF-hand Family:EF-hand modules in multidomain proteins 60 c2zrrA_ not modelled 13.6 24 PDB header:antimicrobial protein Chain: A: PDB Molecule:mundticin ks immunity protein; PDBTitle: crystal structure of an immunity protein that contributes2 to the self-protection of bacteriocin-producing3 enterococcus mundtii 15-1a 61 c2e6oA_ not modelled 13.6 5 PDB header:transcription, cell cycle Chain: A: PDB Molecule:hmg box-containing protein 1; PDBTitle: solution structure of the hmg box domain from human hmg-box2 transcription factor 1 62 d1q20a_ not modelled 13.6 22 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:PAPS sulfotransferase 63 c1j3xA_ not modelled 13.2 6 PDB header:dna binding protein Chain: A: PDB Molecule:high mobility group protein 2; PDBTitle: solution structure of the n-terminal domain of the hmgb2 64 d1j3xa_ not modelled 13.2 6 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 65 c3ktdC_ not modelled 13.2 12 PDB header:oxidoreductase Chain: C: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of a putative prephenate dehydrogenase (cgl0226)2 from corynebacterium glutamicum atcc 13032 at 2.60 a resolution 66 d1olma1 not modelled 13.1 24 Fold:RuvA C-terminal domain-like Superfamily:CRAL/TRIO N-terminal domain Family:CRAL/TRIO N-terminal domain 67 d1hsma_ not modelled 12.9 10 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 68 c2co9A_ not modelled 12.8 18 PDB header:transcription Chain: A: PDB Molecule:thymus high mobility group box protein tox; PDBTitle: solution structure of the hmg_box domain of thymus high2 mobility group box protein tox from mouse 69 d3proc1 not modelled 12.7 23 Fold:Alpha-lytic protease prodomain-like Superfamily:Alpha-lytic protease prodomain Family:Alpha-lytic protease prodomain 70 c2gwhA_ not modelled 12.7 22 PDB header:transferase Chain: A: PDB Molecule:sulfotransferase 1c2; PDBTitle: human sulfotranferase sult1c2 in complex with pap and2 pentachlorophenol 71 c1wnmA_ not modelled 12.7 21 PDB header:transcription Chain: A: PDB Molecule:fibroin-modulator binding-protein-1; PDBTitle: nmr structure of fmbp-1 tandem repeat 2 in 30%(v/v) tfe2 solution 72 d1hbrb_ not modelled 12.5 31 Fold:Globin-like Superfamily:Globin-like Family:Globins 73 d1wh5a_ not modelled 12.5 14 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 74 d1a9we_ not modelled 12.2 15 Fold:Globin-like Superfamily:Globin-like Family:Globins 75 d1ckta_ not modelled 12.2 6 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 76 c3ls1A_ not modelled 11.6 9 PDB header:photosynthesis Chain: A: PDB Molecule:sll1638 protein; PDBTitle: crystal structure of cyanobacterial psbq from synechocystis2 sp. pcc 6803 complexed with zn2+ 77 d1gyxa_ not modelled 11.3 21 Fold:Tautomerase/MIF Superfamily:Tautomerase/MIF Family:4-oxalocrotonate tautomerase-like 78 d1v65a_ not modelled 11.3 17 Fold:KRAB domain (Kruppel-associated box) Superfamily:KRAB domain (Kruppel-associated box) Family:KRAB domain (Kruppel-associated box) 79 d3bfxa1 not modelled 11.3 17 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:PAPS sulfotransferase 80 c1wz6A_ not modelled 11.3 10 PDB header:transcription Chain: A: PDB Molecule:hmg-box transcription factor bbx; PDBTitle: solution structure of the hmg_box domain of murine bobby2 sox homolog 81 d1a4fb_ not modelled 11.2 23 Fold:Globin-like Superfamily:Globin-like Family:Globins 82 c2ctrA_ not modelled 11.1 14 PDB header:chaperone Chain: A: PDB Molecule:dnaj homolog subfamily b member 9; PDBTitle: solution structure of j-domain from human dnaj subfamily b2 menber 9 83 d2h8fb1 not modelled 11.1 23 Fold:Globin-like Superfamily:Globin-like Family:Globins 84 c2d7lA_ not modelled 11.0 13 PDB header:gene regulation, dna binding protein Chain: A: PDB Molecule:wd repeat and hmg-box dna binding protein 1; PDBTitle: solution structure of the hmg box domain from human wd2 repeat and hmg-box dna binding protein 1 85 d1k99a_ not modelled 10.5 22 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 86 d1i11a_ not modelled 10.4 6 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 87 d1xv1a_ not modelled 10.2 27 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:PAPS sulfotransferase 88 d1ijwc_ not modelled 10.1 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Recombinase DNA-binding domain 89 d1ls6a_ not modelled 10.1 20 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:PAPS sulfotransferase 90 c3u3oA_ not modelled 10.1 20 PDB header:transferase Chain: A: PDB Molecule:sulfotransferase 1a1; PDBTitle: crystal structure of human sult1a1 bound to pap and two 3-cyano-7-2 hydroxycoumarin 91 d2p81a1 not modelled 10.1 22 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 92 d1sknp_ not modelled 10.0 21 Fold:A DNA-binding domain in eukaryotic transcription factors Superfamily:A DNA-binding domain in eukaryotic transcription factors Family:A DNA-binding domain in eukaryotic transcription factors 93 d1v4wb_ not modelled 10.0 15 Fold:Globin-like Superfamily:Globin-like Family:Globins 94 d1fmja_ not modelled 10.0 20 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:PAPS sulfotransferase 95 c2cs1A_ not modelled 9.8 14 PDB header:dna binding protein Chain: A: PDB Molecule:pms1 protein homolog 1; PDBTitle: solution structure of the hmg domain of human dna mismatch2 repair protein 96 d1s7ea1 not modelled 9.7 29 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:Homeodomain 97 c1hmfA_ not modelled 9.4 9 PDB header:dna-binding Chain: A: PDB Molecule:high mobility group protein fragment-b; PDBTitle: structure of the hmg box motif in the b-domain of hmg1 98 d1hmfa_ not modelled 9.4 9 Fold:HMG-box Superfamily:HMG-box Family:HMG-box 99 c2yulA_ not modelled 9.4 18 PDB header:transcription Chain: A: PDB Molecule:transcription factor sox-17; PDBTitle: solution structure of the hmg box of human transcription2 factor sox-17