Email l.a.kelley@imperial.ac.uk Description P39279 Date Thu Jan 5 11:58:48 GMT 2012 Unique Job ID 6d9ca16b82119ff1

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3fggA_ 32.7 46 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein bce2196; PDBTitle: crystal structure of putative ecf-type sigma factor negative effector2 from bacillus cereus 2 c1nw1A_ 22.4 23 PDB header:transferase Chain: A: PDB Molecule:choline kinase (49.2 kd); PDBTitle: crystal structure of choline kinase 3 d1nw1a_ 22.4 23 Fold:Protein kinase-like (PK-like) Superfamily:Protein kinase-like (PK-like) Family:Choline kinase 4 d1v5ma_ 21.7 26 Fold:PH domain-like barrel Superfamily:PH domain-like Family:Pleckstrin-homology domain (PH domain) 5 c3mesB_ 17.9 16 PDB header:transferase Chain: B: PDB Molecule:choline kinase; PDBTitle: crystal structure of choline kinase from cryptosporidium2 parvum iowa ii, cgd3_2030 6 d1bbpa_ 14.0 23 Fold:Lipocalins Superfamily:Lipocalins Family:Retinol binding protein-like 7 c2hzqA_ 13.8 17 PDB header:transport protein Chain: A: PDB Molecule:apolipoprotein d; PDBTitle: crystal structure of human apolipoprotein d (apod) in2 complex with progesterone 8 d2ox7a1 13.7 33 Fold:YopX-like Superfamily:YopX-like Family:YopX-like 9 c3ha4C_ 13.4 24 PDB header:unknown function Chain: C: PDB Molecule:mix1; PDBTitle: crystal structure of the type one membrane protein mix1 from2 leishmania 10 d1gkab_ 12.7 13 Fold:Lipocalins Superfamily:Lipocalins Family:Retinol binding protein-like 11 d1axia_ 12.3 27 Fold:4-helical cytokines Superfamily:4-helical cytokines Family:Long-chain cytokines 12 d2b7ea1 11.2 43 Fold:Another 3-helical bundle Superfamily:FF domain Family:FF domain 13 c1zxjB_ 10.7 21 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:hypothetical protein mg377 homolog; PDBTitle: crystal structure of the hypthetical mycoplasma protein,2 mpn555 14 c1h4tD_ 10.4 25 PDB header:aminoacyl-trna synthetase Chain: D: PDB Molecule:prolyl-trna synthetase; PDBTitle: prolyl-trna synthetase from thermus thermophilus complexed2 with l-proline 15 d2p84a1 10.0 31 Fold:YopX-like Superfamily:YopX-like Family:YopX-like 16 c2qyzA_ 9.9 38 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of the uncharacterized protein ctc02137 from2 clostridium tetani e88 17 d1osce_ 9.0 13 Fold:Ferredoxin-like Superfamily:GlnB-like Family:Divalent ion tolerance proteins CutA (CutA1) 18 d1pm1x_ 8.8 13 Fold:Lipocalins Superfamily:Lipocalins Family:Retinol binding protein-like 19 c3c8uA_ 8.7 14 PDB header:transferase Chain: A: PDB Molecule:fructokinase; PDBTitle: crystal structure of putative fructose transport system kinase2 (yp_612366.1) from silicibacter sp. tm1040 at 1.95 a resolution 20 d1whra_ 8.0 14 Fold:IF3-like Superfamily:R3H domain Family:R3H domain 21 c1wqdA_ not modelled 7.9 46 PDB header:toxin Chain: A: PDB Molecule:omtx2; PDBTitle: an unusual fold for potassium channel blockers: nmr2 structure of three toxins from the scorpion opisthacanthus3 madagascariensis 22 c3fwlA_ not modelled 7.9 21 PDB header:transferase, hydrolase Chain: A: PDB Molecule:penicillin-binding protein 1b; PDBTitle: crystal structure of the full-length transglycosylase pbp1b2 from escherichia coli 23 c3lx6B_ not modelled 7.7 21 PDB header:transferase Chain: B: PDB Molecule:cytosine-specific methyltransferase; PDBTitle: structure of probable cytosine-specific methyltransferase from2 shigella flexneri 24 d1hgua_ not modelled 7.4 17 Fold:4-helical cytokines Superfamily:4-helical cytokines Family:Long-chain cytokines 25 c1wqcA_ not modelled 7.3 46 PDB header:toxin Chain: A: PDB Molecule:omtx1; PDBTitle: an unusual fold for potassium channel blockers : nmr2 structure of three toxins from the scorpion opisthacanthus3 madagascariensis 26 d1v65a_ not modelled 7.2 25 Fold:KRAB domain (Kruppel-associated box) Superfamily:KRAB domain (Kruppel-associated box) Family:KRAB domain (Kruppel-associated box) 27 d1mg4a_ not modelled 7.2 40 Fold:beta-Grasp (ubiquitin-like) Superfamily:Doublecortin (DC) Family:Doublecortin (DC) 28 c2l23A_ not modelled 7.0 58 PDB header:transcription Chain: A: PDB Molecule:mediator of rna polymerase ii transcription subunit 25; PDBTitle: nmr structure of the acid (activator interacting domain) of the human2 mediator med25 protein 29 c3rfrI_ not modelled 6.9 13 PDB header:oxidoreductase Chain: I: PDB Molecule:pmob; PDBTitle: crystal structure of particulate methane monooxygenase (pmmo) from2 methylocystis sp. strain m 30 d1m8na_ not modelled 6.6 46 Fold:Single-stranded left-handed beta-helix Superfamily:An insect antifreeze protein Family:An insect antifreeze protein 31 d1clvi_ not modelled 6.5 71 Fold:Knottins (small inhibitors, toxins, lectins) Superfamily:Plant inhibitors of proteinases and amylases Family:Plant inhibitors of proteinases and amylases 32 c3rgbA_ not modelled 6.3 19 PDB header:oxidoreductase Chain: A: PDB Molecule:methane monooxygenase subunit b2; PDBTitle: crystal structure of particulate methane monooxygenase from2 methylococcus capsulatus (bath) 33 c1yewI_ not modelled 6.3 19 PDB header:oxidoreductase, membrane protein Chain: I: PDB Molecule:particulate methane monooxygenase, b subunit; PDBTitle: crystal structure of particulate methane monooxygenase 34 c2qrvA_ not modelled 6.3 22 PDB header:transferase/transferase regulator Chain: A: PDB Molecule:dna (cytosine-5)-methyltransferase 3a; PDBTitle: structure of dnmt3a-dnmt3l c-terminal domain complex 35 c3dwlF_ not modelled 6.3 20 PDB header:structural protein Chain: F: PDB Molecule:actin-related protein 2/3 complex subunit 4; PDBTitle: crystal structure of fission yeast arp2/3 complex lacking the arp22 subunit 36 d1ewna_ not modelled 6.2 27 Fold:FMT C-terminal domain-like Superfamily:FMT C-terminal domain-like Family:3-methyladenine DNA glycosylase (AAG, ANPG, MPG) 37 c3chxE_ not modelled 6.0 12 PDB header:membrane protein Chain: E: PDB Molecule:pmob; PDBTitle: crystal structure of methylosinus trichosporium ob3b2 particulate methane monooxygenase (pmmo) 38 c2qrvC_ not modelled 5.9 20 PDB header:transferase/transferase regulator Chain: C: PDB Molecule:dna (cytosine-5)-methyltransferase 3-like; PDBTitle: structure of dnmt3a-dnmt3l c-terminal domain complex 39 d1wjpa2 not modelled 5.9 46 Fold:beta-beta-alpha zinc fingers Superfamily:beta-beta-alpha zinc fingers Family:Classic zinc finger, C2H2 40 d1v7wa2 not modelled 5.8 13 Fold:Supersandwich Superfamily:Galactose mutarotase-like Family:Glycosyltransferase family 36 N-terminal domain 41 d1n0sa_ not modelled 5.8 20 Fold:Lipocalins Superfamily:Lipocalins Family:Retinol binding protein-like 42 d1mjda_ not modelled 5.8 33 Fold:beta-Grasp (ubiquitin-like) Superfamily:Doublecortin (DC) Family:Doublecortin (DC) 43 d2axla1 not modelled 5.5 15 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:RecQ helicase DNA-binding domain-like 44 d1e6ya1 not modelled 5.2 46 Fold:Methyl-coenzyme M reductase alpha and beta chain C-terminal domain Superfamily:Methyl-coenzyme M reductase alpha and beta chain C-terminal domain Family:Methyl-coenzyme M reductase alpha and beta chain C-terminal domain 45 c3c5iD_ not modelled 5.2 16 PDB header:transferase Chain: D: PDB Molecule:choline kinase; PDBTitle: crystal structure of plasmodium knowlesi choline kinase, pkh_134520 46 c1ydiB_ not modelled 5.1 37 PDB header:cell adhesion, structural protein Chain: B: PDB Molecule:alpha-actinin 4; PDBTitle: human vinculin head domain (vh1, 1-258) in complex with2 human alpha-actinin's vinculin-binding site (residues 731-3 760) 47 c1zx3A_ not modelled 5.1 30 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ne0241; PDBTitle: structure of ne0241 protein of unknown function from nitrosomonas2 europaea