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Job DescriptionP05707
Confidence98.81%DateThu Jan 5 10:58:50 GMT 2012
Rank234Aligned Residues204
% Identity13%Templated2bkaa1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Tyrosine-dependent oxidoreductases
Resolution1.7

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  NQVAVVIGGGQTLGAFLCHGLAAEGYRVAVVDIQSDKAANVAQEINAEYGESMAYGFGADATSEQSVLALSRGVDEIFGR
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Template Sequence  NKSVFILGASGETGRVLLKEILEQGLFSKVTLI. . . . . . . . . . . . . . . . . . . . . . . . . . . GRRKLTFDEEAYKNVNQEVV
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TTST

S...........................SS




SGGGGG

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   18.20.........30.........40.........50 .........60.........70
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  VDLLVYSAGIAKAAFISDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGG
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Template Sequence  DFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSNFLYLQVKGEV
Template Known Secondary structure 
GGGGGGGGGGGSS
S




TTT



TT

TT
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   71........80.........90.........100.........110.........120.........130.........140.........150
 
   162.......170.........180.........190.........200.........210.........220.. .......230.......
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Query Sequence  VGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDKVPLK. . . . RGCDYQDVLNMLLFY
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Template Sequence  EAKVEELKFD. . . . . . RYSVFRPGVLL. . . . . . . . . . . CDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNN
Template Known Secondary structure  TT

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TTGGGS
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TTGGGGT
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   151........160 .........170. ........180.........190.........200.........210...
 
   238.240.........250.
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Query Sequence  ASPKASYCTGQSIN
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Template Sequence  VVRPR. . DKQMELL
Template Known Secondary structure  TS

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   214.... .220.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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