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Job DescriptionP05707
Confidence100.00%DateThu Jan 5 10:58:50 GMT 2012
Rank79Aligned Residues240
% Identity28%Templatec3v2gA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] reductase; PDBTitle: crystal structure of a dehydrogenase/reductase from sinorhizobium2 meliloti 1021
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  NQVAVVIGGGQTLGAFLCHGLAAEGYRVAVVDIQSDKAANVAQEINAEYGESMAYGFGADATSEQSVLALSRGVDEIFGR
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Template Sequence  GKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAG. GRAVAIRADNRDAEAIEQAIRETVEALGG
Template Known Secondary structure  T
TTTSTT
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   31........40.........50.........60.........70.........80 .........90.........100.........
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  VDLLVYSAGIAKAAFISDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGG
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Template Sequence  LDILVNSAGIWHSAPLEETTVADFDEVXAVNFRAPFVAIRSASRHLGD. . GGRIITIGSNLAELVPWPGISLYSASKAAL
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GGG

T

T..T


GGGT


STT
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   110.........120.........130.........140.........150....... ..160.........170.........180.......
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  VGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDKVPLKRGCDYQDVLNMLLFYASPK
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Template Sequence  AGLTKGLARDLGPRGITVNIVHPGST. DTDXNPADGDHA. . . . . . . . . . . . EAQRERIATGSYGEPQDIAGLVAWLAGPQ
Template Known Secondary structure  GGGT

SB.
SSSS
SS
SS............T
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SGG
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   188.190.........200.........210... ......220..... ....230.........240.........250....
 
   242.......250.......
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Query Sequence  ASYCTGQSINVTGGQV
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Template Sequence  GKFVTGASLTIDGGAN
Template Known Secondary structure  GTT

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   255....260.........270
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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