Return to main results Retrieve Phyre Job Id

Job DescriptionP05707
Confidence100.00%DateThu Jan 5 10:58:50 GMT 2012
Rank1Aligned Residues254
% Identity30%Templatec3sjuA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:keto reductase; PDBTitle: hedamycin polyketide ketoreductase bound to nadph
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  QVAVVIGGGQTLGAFLCHGLAAEGYRVAVVDIQSDKAANVAQEINAEYGESMAYGFGADATSEQSVLALSRGVDEIFGRV
Query Conservation 








 


 


  

  

 


  
    
      
              
                     
Alig confidence 

















































..



























Template Conservation 
 






 


 
 
  
   

 

   
           
      ..                            
Template Sequence  QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHD. . VDGSSCDVTSTDEVHAAVAAAVERFGPI
Template Known Secondary structure 
STTSTT
S
TTT

..

TT

S
Template Predicted Secondary structure 













..



























Template SS confidence 















































































   5....10.........20.........30.........40.........50.... .....60.........70.........80..
 
   83......90.........100.........110.........120..... ....130.........140.........150.........160.
Predicted Secondary structure 
































.















Query SS confidence 










































.



































Query Sequence  DLLVYSAGIAKAAFISDFQLGDFDRSLQVNLVGYFLCAREFSR. LMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGG
Query Conservation                                             .               
            
  

   
Alig confidence 










































.



































Template Conservation                                                            

            
  

   
Template Sequence  GILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGV
Template Known Secondary structure 







S
GGG

TSST


GGGTS

TT
Template Predicted Secondary structure 

























































Template SS confidence 















































































   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  VGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDKVPLKRGCDYQDVLNMLLFYASPK
Query Conservation         
       
 

 
 

 
  
 
                           
  
   




     


  
Alig confidence 

























.




















































Template Conservation         
 
     
 

 
 

 
. 
                             



   
 


  
 

 
  
Template Sequence  VGFTKSVGFELAKTGITVNAVCPGYV. ETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVTDA
Template Known Secondary structure  TGGGTSSB.
SS

SSS


TT
TTSS
B
TSSG
Template Predicted Secondary structure 








.

















Template SS confidence 















































































   163......170.........180........ .190.........200.........210.........220.........230.........240.
 
   242.......250.........
Predicted Secondary structure 












Query SS confidence 

















Query Sequence  ASYCTGQSINVTGGQVMF
Query Conservation 
  


  
 



    
Alig confidence 

















Template Conservation 
  


  
 



    
Template Sequence  AASITAQALNVCGGLGNY
Template Known Secondary structure  GGG

S
STT



Template Predicted Secondary structure 












Template SS confidence 

















   242.......250.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions