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Job DescriptionP05707
Confidence100.00%DateThu Jan 5 10:58:50 GMT 2012
Rank75Aligned Residues241
% Identity33%Templatec3osuA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] reductase; PDBTitle: crystal structure of the 3-oxoacyl-acyl carrier protein reductase,2 fabg, from staphylococcus aureus
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30... ......40.........50.........60.........70.........80
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Query Sequence  NQVAVVIGGGQTLGAFLCHGLAAEGYRVAVVD. IQSDKAANVAQEINAEYGESMAYGFGADATSEQSVLALSRGVDEIFG
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Template Sequence  TKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVD. . SFAIQANVADADEVKAXIKEVVSQFG
Template Known Secondary structure  S
TT
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TT
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   4.....10.........20.........30.........40.........50..... ....60.........70.........80.
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  RVDLLVYSAGIAKAAFISDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFG
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Template Sequence  SLDVLVNNAGITRDNLLXRXKEQEWDDVIDTNLKGVFNCIQKAT. PQXLRQRSGAIINLSSVVGAVGNPGQANYVATKAG
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TTT

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   82.......90.........100.........110.........120..... ....130.........140.........150.........160
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  GVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDKVPLKRGCDYQDVLNMLLFYASP
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Template Sequence  VIGLTKSAARELASRGITVNAVAPG. FIVSDX. . . . . . . . . . . TDALSDELKEQXLTQIPLARFGQDTDIANTVAFLASD
Template Known Secondary structure  GGGT
.SBGGG
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S
S
TT
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S
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   161........170.........180..... ....190. ........200.........210.........220........
 
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Query Sequence  KASYCTGQSINVTGGQV
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Template Sequence  KAKYITGQTIHVNGGXY
Template Known Secondary structure  GGTT

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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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