Job Description P05707 Confidence 98.98% Date Thu Jan 5 10:58:50 GMT 2012 Rank 227 Aligned Residues 195 % Identity 16% Template c3oh8A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:nucleoside-diphosphate sugar epimerase (sula family); PDBTitle: crystal structure of the nucleoside-diphosphate sugar epimerase from2 corynebacterium glutamicum. northeast structural genomics consortium3 target cgr91 Resolution 2.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	A	V	V	I	G	G	G	Q	T	L	G	A	F	L	C	H	G	L	A	A	E	G	Y	R	V	A	V	V	D	I	Q	S	D	K	A	A	N	V	A	Q	E	I	N	A	E	Y	G	E	S	M	A	Y	G	F	G	A	D	A	T	S	E	Q	S	V	L	A	L	S	R	G	V	D	E	I	F	G	R	V
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Sequence		L	T	V	A	I	T	G	S	R	G	L	V	G	R	A	L	T	A	Q	L	Q	T	G	G	H	E	V	I	Q	L	V	R	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	P	K	P	G	K	R	F	W	D	P	L	N	P	A	S	.	.	.	.	.	.	.	.	.	D	L	L	D	G	A
Template Known Secondary structure								S	T	T	S													T	T								S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S			T	T						T	T	S			T	.	.	.	.	.	.	.	.	.	T	T	T	T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180																	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.										.	.	.	200	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.												.	.	.	150	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	L	L	V	Y	S	A	G	I	A	K	A	A	F	I	S	D	F	Q	L	G	D	F	D	R	S	L	Q	V	N	L	V	G	Y	F	L	C	A	R	E	F	S	R	L	M	I	R	D	G	I	Q	G	R	I	I	Q	I	N	S	K	S	G	K	V	.	.	.	.	.	.	.	.	.	.	.	G	S	K	H	N
Query Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	L	V	H	L	A	G	.	.	.	.	.	.	.	.	.	.	.	.	E	F	N	D	S	H	K	E	A	I	R	E	S	R	V	L	P	T	K	F	L	A	E	L	V	A	E	S	T	Q	C	T	T	X	I	S	A	S	A	V	G	F	Y	G	H	D	R	G	D	E	I	L	T	E	E	S	E	S	G	D
Template Known Secondary structure		S								.	.	.	.	.	.	.	.	.	.	.	.				G	G	G								T															S	S										G	G	G	G		S									T	T	S				S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		203	.	.	.	.	.	.	210													.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		S	G	Y	S	A	A	K	F	G	G	V	G	L	T	Q	S	L	A	L	D	L	A	E	Y	G	I	T	V	H	S	L	M	L	G	N	L	L	K	S	P	M	F	Q	S	L	L	P	Q	Y	A	T	K	L	G	I	K	P	D	Q	V	E	Q	Y	Y	I	D	K	V	P	L	K	R	G	C	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence																					.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.
Template Conservation																					.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	F	L	A	E	V	C	R	D	W	E	H	A	T	A	P	A	S	D	.	.	.	.	A	G	K	R	V	A	F	I	R	T	G	V	A	L	S	G	R	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	X	L	P	L	L	K	T	L	F	S	G	G	K	F	G	D	G	T	S	W	F
Template Known Secondary structure		S												T	T						.	.	.	.	T	T													B	T	T	B	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T						T	T	S
Template Predicted Secondary structure																					.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.					.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.																		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
					226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	D	Y	Q	D	V	L	N	M	L	L	F	Y	A	S	P	K	A	S	Y	C	T	G	Q	S	I	N	V	T	G	G	Q	V	M
Query Conservation		.	.	.
Alig confidence		.	.	.																		.	.				.
Template Conservation																						.	.				.
Template Sequence		S	W	I	A	I	D	D	L	T	D	I	Y	Y	R	A	I	V	D	A	Q	.	.	I	S	G	.	P	I	N	A	V	A	P	N	P	V
Template Known Secondary structure																				T	T	.	.				.					S		S
Template Predicted Secondary structure																						.	.				.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.			.	.	360		.	.	.	.	.	.	.	.	.	370

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions