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Job DescriptionP05707
Confidence100.00%DateThu Jan 5 10:58:50 GMT 2012
Rank93Aligned Residues223
% Identity22%Templatec3n74A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:3-ketoacyl-(acyl-carrier-protein) reductase; PDBTitle: crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase from2 brucella melitensis
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  NQVAVVIGGGQTLGAFLCHGLAAEGYRVAVVDIQSDKAANVAQEINAEYGESMAYGFGADATSEQSVLALSRGVDEIFGR
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Template Sequence  GKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAAL. AVAADISKEADVDAAVEAALSKFGKVDIL
Template Known Secondary structure  T
TTTSTT
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   5....10.........20.........30.........40.........50.... .....60.........70.........80...
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  VDLLVYSAGIAKAAFISDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGG
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Template Sequence  VNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWV
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S

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TT
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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  VGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDKVPLKRGCDYQDVLNMLLFYASPK
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Template Sequence  VSVTKALAIELAPAKIRVVALNPV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IPMGRLLKPDDLAEAAAFLCSPQ
Template Known Secondary structure  GGGT
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   164.....170.........180....... ..190.........200.........210
 
   242.......250........
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Query Sequence  ASYCTGQSINVTGGQVM
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Template Sequence  ASMITGVALDVDGGRSI
Template Known Secondary structure  GTT

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   236...240.........250..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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