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Job DescriptionP05707
Confidence100.00%DateThu Jan 5 10:58:50 GMT 2012
Rank3Aligned Residues256
% Identity21%Templatec3lf2B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:short chain oxidoreductase q9hya2; PDBTitle: nadph bound structure of the short chain oxidoreductase q9hya2 from2 pseudomonas aeruginosa pao1 containing an atypical catalytic center
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  NQVAVVIGGGQTLGAFLCHGLAAEGYRVAVVDIQSDKAANVAQEINAEYGESMAYGFGADATSEQSVLALSRGVDEIFGR
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Template Sequence  EAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGC
Template Known Secondary structure  T
S
SSTT
S
STT



TT

S
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   8.10.........20.........30.........40.........50.........60.........70.........80.......
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  VDLLVYSAGIAKAAFISDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGG
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Template Sequence  ASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFL. PQLESRADAAIVCVNSLLASQPEPHMVATSAARAGV
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S






B
STT

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GGGTS

TTB
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   88.90.........100.........110.........120.........130 .........140.........150.........160......
 
   162.......170.........180.........190.........200.........210. ........220.........230.........240
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Query Sequence  VGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQV. EQYYIDKVPLKRGCDYQDVLNMLLFYASP
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Template Sequence  KNLVRSMAFEFAPKGVRVNGILIG. LVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFLASP
Template Known Secondary structure  GGGT

.SB
ST
S
TT

TT
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B
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   167..170.........180.........190 .........200.........210.........220.........230.........240.....
 
   241........250.........
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Query Sequence  KASYCTGQSINVTGGQVMF
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Template Sequence  LSAYTTGSHIDVSGGLSRH
Template Known Secondary structure  GGTT

S
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   246...250.........260....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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