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Job DescriptionP05707
Confidence100.00%DateThu Jan 5 10:58:50 GMT 2012
Rank163Aligned Residues233
% Identity16%Templatec3kvoB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:hydroxysteroid dehydrogenase-like protein 2; PDBTitle: crystal structure of the catalytic domain of human hydroxysteroid2 dehydrogenase like 2 (hsdl2)
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50... ......60.........70......
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Query Sequence  NQVAVVIGGGQTLGAFLCHGLAAEGYRVAVVDIQSDKAANVAQEINAEYGES. . . . . MAYGFGADATSEQSVLALSRGVD
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Template Sequence  GCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAI
Template Known Secondary structure  T
T
SSTTT
S
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T


TT
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Query Sequence  EIFGRVDLLVYSAGIAKAAFISDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVG. . SKHNSGY
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Template Sequence  KKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACI. PYLKKSKVAHILNISPPLNLNPVWFKQHCAY
Template Known Secondary structure  S











TTTS
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   155....160.........170.........180.........190.........200.........210.........220.........230....
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Query Sequence  SAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDKVPLKRGCDYQDVLNML
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Template Sequence  TIAKYGMSMYVLGMAEEFKG. EIAVNALWPK. TAIHTAA. . . . . . . . . . . . . . . . . . MDMLGGPGIESQCRKVDIIADAA
Template Known Secondary structure  TTT.T

S.B
B

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TTGGGG
B
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   169170.........180........ .190........ .200..... ....210.........220........
 
   235....240.........250.......
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Query Sequence  LFYASPKASYCTGQSINVTGGQV
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Template Sequence  . YSIFQKPKSFTGNFV. IDENIL
Template Known Secondary structure  .TS
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   229230.........240... ......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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