Job Description P05707 Confidence 100.00% Date Thu Jan 5 10:58:50 GMT 2012 Rank 147 Aligned Residues 242 % Identity 24% Template c3ioyB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:short-chain dehydrogenase/reductase sdr; PDBTitle: structure of putative short-chain dehydrogenase (saro_0793)2 from novosphingobium aromaticivorans Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Q	V	A	V	V	I	G	G	G	Q	T	L	G	A	F	L	C	H	G	L	A	A	E	G	Y	R	V	A	V	V	D	I	Q	S	D	K	A	A	N	V	A	Q	E	I	N	A	E	Y	G	E	S	M	A	Y	G	F	G	A	D	A	T	S	E	Q	S	V	L	A	L	S	R	G	V	D	E	I	F	G	R
Query Conservation
Alig confidence																																																				.
Template Conservation																																																				.
Template Sequence		G	R	T	A	F	V	T	G	G	A	N	G	V	G	I	G	L	V	R	Q	L	L	N	Q	G	C	K	V	A	I	A	D	I	R	Q	D	S	I	D	K	A	L	A	T	L	E	A	E	S	G	.	P	E	V	M	G	V	Q	L	D	V	A	S	R	E	G	F	K	M	A	A	D	E	V	E	A	R	F	G	P
Template Known Secondary structure		T							T	T	T	S	T											T	T	T								S														T				.	T	T								T	T
Template Predicted Secondary structure																																																				.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.						130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.
Query Sequence		V	D	L	L	V	Y	S	A	G	I	A	K	A	A	F	I	S	D	F	Q	L	G	D	F	D	R	S	L	Q	V	N	L	V	G	Y	F	L	C	A	R	E	F	S	R	L	M	I	R	.	.	.	.	.	D	G	I	Q	G	R	I	I	Q	I	N	S	K	S	G	K	V	G	S	K	H	N	S	G	Y	S	A
Query Conservation																																																		.	.	.	.	.
Alig confidence																																																		.	.	.	.	.
Template Conservation
Template Sequence		V	S	I	L	C	N	N	A	G	V	N	L	F	Q	P	I	E	E	S	S	Y	D	D	W	D	W	L	L	G	V	N	L	H	G	V	V	N	G	V	T	T	F	V	P	R	M	V	E	R	V	K	A	G	E	Q	K	G	G	H	V	V	N	T	A	S	M	A	A	F	L	A	A	G	S	P	G	I	Y	N	T
Template Known Secondary structure																	G	G	G														T																				T	T	S												G	G	G	T				S	T	T
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	F	G	G	V	G	L	T	Q	S	L	A	L	D	L	A	E	Y	G	I	T	V	H	S	L	M	L	G	N	L	L	K	S	P	M	F	Q	S	L	L	P	Q	Y	A	T	K	L	G	I	K	P	D	Q	V	E	Q	Y	Y	I	D	K	V	P	L	K	R	G	C	D	Y	Q	D	V	L	N	M	L	L	F
Query Conservation
Alig confidence																															.																				.	.	.	.	.	.
Template Conservation																															.																				.	.	.	.	.	.
Template Sequence		T	K	F	A	V	R	G	L	S	E	S	L	H	Y	S	L	L	K	Y	E	I	G	V	S	V	L	C	P	G	.	L	V	K	H	E	F	G	M	E	P	D	V	I	G	A	R	V	I	E	.	.	.	.	.	.	A	M	K	A	N	R	L	H	I	F	S	H	P	D	H	K	E	E	L	R	E	V	F	D	E
Template Known Secondary structure																		G	G	G	T										.		B				S	S	B												.	.	.	.	.	.					T		S						G	G	G
Template Predicted Secondary structure																															.																				.	.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.							.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	S	P	K	A	S	Y	C	T	G	Q	S	I	N	V	T	G	G	Q	V
Query Conservation
Alig confidence											.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.
Template Sequence		I	I	A	E	Y	Q	D	Y	P	.	.	.	.	.	.	K	D	P	G	Y	D
Template Known Secondary structure					T						.	.	.	.	.	.			T	T
Template Predicted Secondary structure											.	.	.	.	.	.
Template SS confidence
		271	.	.	.	.	.	.	.	.							280	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions