Job Description P05707 Confidence 100.00% Date Thu Jan 5 10:58:50 GMT 2012 Rank 36 Aligned Residues 245 % Identity 28% Template c3gvcB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:probable short-chain type PDBTitle: crystal structure of probable short-chain dehydrogenase-2 reductase from mycobacterium tuberculosis Resolution 2.45 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Q	V	A	V	V	I	G	G	G	Q	T	L	G	A	F	L	C	H	G	L	A	A	E	G	Y	R	V	A	V	V	D	I	Q	S	D	K	A	A	N	V	A	Q	E	I	N	A	E	Y	G	E	S	M	A	Y	G	F	G	A	D	A	T	S	E	Q	S	V	L	A	L	S	R	G	V	D	E	I	F	G	R
Query Conservation
Alig confidence																																																				.	.	.	.	.
Template Conservation																																																				.	.	.	.	.
Template Sequence		G	K	V	A	I	V	T	G	A	G	A	G	I	G	L	A	V	A	R	R	L	A	D	E	G	C	H	V	L	C	A	D	I	D	G	D	A	A	D	A	A	A	T	K	I	G	C	G	A	A	.	.	.	.	.	A	C	R	V	D	V	S	D	E	Q	Q	I	I	A	M	V	D	A	C	V	A	A	F	G	G
Template Known Secondary structure		T							T	T	T	S													T	T								S	S													T	T			.	.	.	.	.						T	T																	S
Template Predicted Secondary structure																																																				.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.						.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	L	L	V	Y	S	A	G	I	A	K	A	A	F	I	S	D	F	Q	L	G	D	F	D	R	S	L	Q	V	N	L	V	G	Y	F	L	C	A	R	E	F	S	R	L	M	I	R	D	G	I	Q	G	R	I	I	Q	I	N	S	K	S	G	K	V	G	S	K	H	N	S	G	Y	S	A	A	K	F	G	G
Query Conservation
Alig confidence																																													.
Template Conservation																																													.
Template Sequence		V	D	K	L	V	A	N	A	G	V	V	H	L	A	S	L	I	D	T	T	V	E	D	F	D	R	V	I	A	I	N	L	R	G	A	W	L	C	T	K	H	A	A	.	P	R	M	I	E	R	G	G	G	A	I	V	N	L	S	S	L	A	G	Q	V	A	V	G	G	T	G	A	Y	G	M	S	K	A	G	I
Template Known Secondary structure															B		T	T	T																										.							T										G	G	G	T	S			T	T	B
Template Predicted Secondary structure																																													.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	L	T	Q	S	L	A	L	D	L	A	E	Y	G	I	T	V	H	S	L	M	L	G	N	L	L	K	S	P	M	F	Q	S	L	L	P	Q	Y	A	T	K	L	G	I	K	P	D	Q	V	E	Q	Y	Y	I	D	K	V	P	L	K	R	G	C	D	Y	Q	D	V	L	N	M	L	L	F	Y	A	S	P	K
Query Conservation
Alig confidence																										.																				.	.	.	.	.	.
Template Conservation																										.																				.	.	.	.	.	.
Template Sequence		I	Q	L	S	R	I	T	A	A	E	L	R	S	S	G	I	R	S	N	T	L	L	P	A	.	F	V	D	T	P	M	Q	Q	T	A	M	A	M	F	D	G	A	L	G	.	.	.	.	.	.	G	A	R	S	M	I	A	R	L	Q	G	R	M	A	A	P	E	E	M	A	G	I	V	V	F	L	L	S	D	D
Template Known Secondary structure													G	G	G	T										.	S	B		S							T	T				S	S			.	.	.	.	.	.											S	S		B														S	G	G
Template Predicted Secondary structure																										.																				.	.	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.							.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.			.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		A	S	Y	C	T	G	Q	S	I	N	V	T	G	G	Q	V	.	.	M	F
Query Conservation																		.	.
Alig confidence																		.	.
Template Conservation
Template Sequence		A	S	M	I	T	G	T	T	Q	I	A	D	G	G	T	I	A	A	L	W
Template Known Secondary structure		G	T	T			S						S	T	T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions