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Job DescriptionP05707
Confidence100.00%DateThu Jan 5 10:58:50 GMT 2012
Rank32Aligned Residues239
% Identity30%Templatec3gk3D_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:acetoacetyl-coa reductase; PDBTitle: crystal structure of acetoacetyl-coa reductase from2 burkholderia pseudomallei 1710b
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  NQVAVVIGGGQTLGAFLCHGLAAEGYRVAVVDIQSDKAANVAQEINAEYGESMAYGFGADATSEQSVLALSRGVDEIFGR
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Template Sequence  KRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSVSTWLMHERDAG. . . . . . RDFKAYAVDVADFESCERCAEKVLADFGK
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  VDLLVYSAGIAKAAFISDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGG
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Template Sequence  VDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFI. AGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGI
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   83......90.........100.........110.........120..... ....130.........140.........150.........160.
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  VGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDKVPLKRGCDYQDVLNMLLFYASPK
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Template Sequence  HGFTKTLALETAKRGITVNTVSPG. YLATAMVEAVPQ. . . . . . . . . . DVLEAKILPQIPVGRLGRPDEVAALIAFLCSDD
Template Known Secondary structure  SGGGT
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   162.......170.........180..... ....190....... ..200.........210.........220.........230
 
   242.......250........
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Query Sequence  ASYCTGQSINVTGGQVM
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Template Sequence  AGFVTGADLAINGGMHM
Template Known Secondary structure  GTT

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   231........240.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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