Return to main results Retrieve Phyre Job Id

Job DescriptionP05707
Confidence100.00%DateThu Jan 5 10:58:50 GMT 2012
Rank97Aligned Residues244
% Identity22%Templatec3gdfA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:probable nadp-dependent mannitol dehydrogenase; PDBTitle: crystal structure of the nadp-dependent mannitol dehydrogenase from2 cladosporium herbarum.
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10. ........20.........30.........40.........50.........60.........70.........
Predicted Secondary structure 



..



























Query SS confidence 









. .



































































Query Sequence  NQVAVVIGGG. . QTLGAFLCHGLAAEGYRVAVVDIQSDKAANVAQEINAEYGESMAYGFGADATSEQSVLALSRGVDEIF
Query Conservation 









.. 


 


  

  

 


  
    
      
              
                  
Alig confidence 









..



































































Template Conservation 










 



 
 
  

  

 

   
                          
                  
Template Sequence  GKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADF
Template Known Secondary structure  T
SS

SSSSTT
SS






TT
Template Predicted Secondary structure 






































Template SS confidence 















































































   20.........30.........40.........50.........60.........70.........80.........90.........
 
   80.........90.........100.........110.........120.........130.........140........ .150........
Predicted Secondary structure 
















































.


Query SS confidence 




































































.









Query Sequence  GRVDLLVYSAGIAKAAFISDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGS. KHNSGYSAAK
Query Conservation                                                               
       .     
  

Alig confidence 




































































.









Template Conservation                                                              
                 
 
Template Sequence  GQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAK
Template Known Secondary structure  S

S






S
TTTS
TT



GGGTS

SSS

Template Predicted Secondary structure 












































































Template SS confidence 















































































   100.........110.........120.........130.........140.........150.........160.........170.........
 
   159160.........170.........180.........190.........200.........210.........220.........230........
Predicted Secondary structure 






















Query SS confidence 















































































Query Sequence  FGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDKVPLKRGCDYQDVLNMLLFYA
Query Conservation            
       
 

 
 

 
  
 
                           
  
   




     

Alig confidence 













.











.









...........






























Template Conservation            
 
 .   
 

 
 

. 
 
      ...........            
  
   




    


Template Sequence  AGCIHMARSLANEW. RDFARVNSISPG. YIDTGLSDFV. . . . . . . . . . . PKETQQLWHSMIPMGRDGLAKELKGAYVYFA
Template Known Secondary structure  T.TTT

.SSS
GGGS...........
STT
S
GGGT
Template Predicted Secondary structure 
.






.







...........









Template SS confidence 















































































   180.........190... ......200..... ....210..... ....220.........230.........240......
 
   239240.........250........
Predicted Secondary structure 












Query SS confidence 



















Query Sequence  SPKASYCTGQSINVTGGQVM
Query Conservation 
  
  


  
 



   
Alig confidence 



















Template Conservation 
  
  


  
 



 
 
Template Sequence  SDASTYTTGADLLIDGGYTT
Template Known Secondary structure  SGGGTT

S
STTGGG
Template Predicted Secondary structure 












Template SS confidence 



















   247..250.........260......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions