Return to main results Retrieve Phyre Job Id

Job DescriptionP05707
Confidence100.00%DateThu Jan 5 10:58:50 GMT 2012
Rank61Aligned Residues235
% Identity29%Templatec3ftpD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:3-oxoacyl-[acyl-carrier protein] reductase; PDBTitle: crystal structure of 3-ketoacyl-(acyl-carrier-protein)2 reductase from burkholderia pseudomallei at 2.05 a3 resolution
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  NQVAVVIGGGQTLGAFLCHGLAAEGYRVAVVDIQSDKAANVAQEINAEYGESMAYGFGADATSEQSVLALSRGVDEIFGR
Query Conservation 









 


 


  

  

 


  
    
      
              
                    
Alig confidence 


















































..


























Template Conservation 

 






 


 


  
   

 

   
                  ..      
                    
Template Sequence  KQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLE. . GRGAVLNVNDATAVDALVESTLKEFGA
Template Known Secondary structure  T
S
SSTT
SST

..


TT
S
Template Predicted Secondary structure 
















..


















Template SS confidence 















































































   7..10.........20.........30.........40.........50....... ..60.........70.........80....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 

















































Query SS confidence 















































































Query Sequence  VDLLVYSAGIAKAAFISDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGG
Query Conservation                                                             
            
  

   
Alig confidence 










































.



































Template Conservation                                             .               
            
  

   
Template Sequence  LNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVL. RPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGV
Template Known Secondary structure 










GGG

T.T



T

TT
Template Predicted Secondary structure 




































.

























Template SS confidence 















































































   85....90.........100.........110.........120....... ..130.........140.........150.........160...
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  VGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDKVPLKRGCDYQDVLNMLLFYASPK
Query Conservation         
       
 

 
 

 
  
 
                           
  
   




     


  
Alig confidence 























.






..................





























Template Conservation         
 
     
 
  
 

. 
 
   ..................        
  
   




     
 
  
Template Sequence  AGMTRALAREIGSRGITVNCVAPG. FIDTDEQ. . . . . . . . . . . . . . . . . . QTALKTQIPLGRLGSPEDIAHAVAFLASPQ
Template Known Secondary structure  GGGT

.SB




..................T
TT
S
B
SGG
Template Predicted Secondary structure 







.
..................









Template SS confidence 















































































   164.....170.........180....... ..190.... .....200.........210.........220....
 
   242.......250........
Predicted Secondary structure 











Query SS confidence 
















Query Sequence  ASYCTGQSINVTGGQVM
Query Conservation 
  


  
 



   
Alig confidence 
















Template Conservation 
   

  
 



  
Template Sequence  AGYITGTTLHVNGGMFM
Template Known Secondary structure  GTT

S
STTSS
Template Predicted Secondary structure 









Template SS confidence 
















   232.......240........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions