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Job DescriptionP05707
Confidence100.00%DateThu Jan 5 10:58:50 GMT 2012
Rank121Aligned Residues223
% Identity22%Templatec3f9iB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] reductase; PDBTitle: crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase2 rickettsia prowazekii
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  NQVAVVIGGGQTLGAFLCHGLAAEGYRVAVVDIQSDKAANVAQEINAEYGESMAYGFGADATSEQSVLALSRGVDEIFGR
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Template Sequence  GKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSN. . . . . . . . . . . . . . . .
Template Known Secondary structure  T
TTTTSTT
S

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TT
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   6...10.........20.........30.........40.........50.........60.........
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  VDLLVYSAGIAKAAFISDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGG
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Template Sequence  . . . . . . LISKTSNLDILVCNAGITDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIGNPGQANYCASKAGL
Template Known Secondary structure  ......T
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   70.........80.........90.........100.........110.........120.........130.........140...
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  VGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDKVPLKRGCDYQDVLNMLLFYASPK
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Template Sequence  IGMTKSLSYEVATRGITVNAVAPG. FIKSDM. . . . . . . . . . . TDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNN
Template Known Secondary structure  GGGT
.SB

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S

T
TTSS
B
SGG
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   156...160.........170......... 180..... ....190.........200.........210.........220...
 
   242.......250........
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Query Sequence  ASYCTGQSINVTGGQVM
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Template Sequence  ASYITGQTLHVNGGMLM
Template Known Secondary structure  GTT

S
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   224.....230.........240
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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