Job Description P05707 Confidence 98.98% Date Thu Jan 5 10:58:50 GMT 2012 Rank 229 Aligned Residues 252 % Identity 13% Template c3enkB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:udp-glucose 4-epimerase; PDBTitle: 1.9a crystal structure of udp-glucose 4-epimerase from2 burkholderia pseudomallei Resolution 1.90 Å

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		1	.			.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		M	N	.	.	Q	V	A	V	V	I	G	G	G	Q	T	L	G	A	F	L	C	H	G	L	A	A	E	G	Y	R	V	A	V	V	D	I	Q	S	D	K	A	A	N	V	A	Q	E	I	N	A	E	Y	G	E	S	M	A	Y	G	F	G	A	D	A	T	S	E	Q	S	V	L	A	L	S	R	G	V	D	E	I
Query Conservation				.	.
Alig confidence				.	.																																																		.																						.	.	.	.	.
Template Conservation																																																							.																						.	.	.	.	.
Template Sequence		M	S	T	K	G	T	I	L	V	T	G	G	A	G	Y	I	G	S	H	T	A	V	E	L	L	A	H	G	Y	D	V	V	I	A	D	N	L	V	N	S	K	R	E	A	I	A	R	I	E	K	I	T	G	.	K	T	P	A	F	H	E	T	D	V	S	D	E	R	A	L	A	R	I	F	D	.	.	.	.	.
Template Known Secondary structure				S	S							T	T	T	S													T	T										S	S	S		T											S	.										T	T											.	.	.	.	.
Template Predicted Secondary structure																																																							.																						.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	R	V	D	L	L	V	Y	S	A	G	I	A	K	A	A	F	I	S	D	F	Q	L	G	D	F	D	R	S	L	Q	V	N	L	V	G	Y	F	L	C	A	R	E	F	S	R	L	M	I	R	D	G	I	Q	G	R	I	I	Q	I	N	S	K	S	G	K	V	G	S	K	H	N	S	G	Y	S	A	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	H	P	I	T	A	A	I	H	F	A	A	L	K	A	V	G	E	S	V	A	K	P	I	E	Y	Y	R	N	N	L	D	S	L	L	S	L	L	R	V	M	R	E	R	A	V	K	R	I	V	F	S	S	S	A	T	V	Y	G	V	P	E	R	S	P	I	D	E	T	F	P	L	S	A	T	N	P	Y	G	Q
Template Known Secondary structure			S																																										T	T										G	G	G	B		S		S	S	S	S	B		T	T	S			B		S	S
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	G	G	V	G	L	T	Q	S	L	A	L	D	L	A	E	Y	G	I	T	V	H	S	L	M	L	G	N	L	L	K	S	P	M	F	Q	S	L	L	P	Q	Y	A	T	K	L	G	I	K	P	D	Q	V	E	Q	Y	Y	I	D	K	V	P	L	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	K	L	M	A	E	Q	I	L	R	D	V	E	A	A	D	P	S	W	R	V	A	T	L	R	Y	F	N	P	V	G	A	H	E	S	G	L	I	G	E	D	P	A	G	I	P	N	N	L	M	P	Y	V	A	Q	V	A	V	G	K	L	E	K	L	R	V	F	G	S	D	Y	P	T	P	D	G	T	G	V	R
Template Known Secondary structure																		T	T																T	T	S	S	S					S	S	S		S	S											T	S	S	S							S		S	S	S	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
			224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	G	C	D	Y	Q	D	V	L	N	M	L	L	F	Y	A	S	P	K	A	S	Y	C	T	G	Q	S	I	N	V	T	G	G	Q	V	M
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		D	Y	I	H	V	V	D	L	A	R	G	H	I	A	A	L	D	A	L	E	R	R	D	A	S	L	T	V	N	L	G	T	G	R	G	Y
Template Known Secondary structure																							T	T	S							S		S
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions