Job Description P05707 Confidence 100.00% Date Thu Jan 5 10:58:50 GMT 2012 Rank 139 Aligned Residues 209 % Identity 24% Template c3edmD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:short chain dehydrogenase; PDBTitle: crystal structure of a short chain dehydrogenase from agrobacterium2 tumefaciens Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Q	V	A	V	V	I	G	G	G	Q	T	L	G	A	F	L	C	H	G	L	A	A	E	G	Y	R	V	A	V	V	D	I	Q	S	D	K	A	A	N	V	A	Q	E	I	N	A	E	Y	G	E	S	M	A	Y	G	F	G	A	D	A	T	S	E	Q	S	V	L	A	L	S	R	G	V	D	E	I	F	G	R
Query Conservation
Alig confidence																																																					.	.
Template Conservation																																																					.	.
Template Sequence		N	R	T	I	V	V	A	G	A	G	R	D	I	G	R	A	C	A	I	R	F	A	Q	E	G	A	N	V	V	L	T	Y	N	G	A	E	G	A	A	T	A	V	A	E	I	E	K	L	G	R	S	.	.	A	L	A	I	K	A	D	L	T	N	A	A	E	V	E	A	A	I	S	A	A	A	D	K	F	G	E
Template Known Secondary structure		T							S		S	S													T	T																						T	T	T			.	.								T	T																		S
Template Predicted Secondary structure																																																					.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	L	L	V	Y	S	A	G	I	A	K	A	A	F	I	S	D	F	Q	L	G	D	F	D	R	S	L	Q	V	N	L	V	G	Y	F	L	C	A	R	E	F	S	R	L	M	I	R	D	G	I	Q	G	R	I	I	Q	I	N	S	K	S	G	K	V	G	S	K	H	N	S	G	Y	S	A	A	K	F	G	G
Query Conservation
Alig confidence																																													.
Template Conservation																																													.
Template Sequence		I	H	G	L	V	H	V	A	G	G	L	I	A	R	K	T	I	A	E	M	D	E	A	F	W	H	Q	V	L	D	V	N	L	T	S	L	F	L	T	A	K	T	A	.	L	P	K	M	A	K	G	G	A	I	V	T	F	S	S	Q	A	G	R	D	G	G	G	P	G	A	L	A	Y	A	T	S	K	G	A	V
Template Known Secondary structure																		T	T	T														T											.	G	G	G																				S	T	T
Template Predicted Secondary structure																																													.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	L	T	Q	S	L	A	L	D	L	A	E	Y	G	I	T	V	H	S	L	M	L	G	N	L	L	K	S	P	M	F	Q	S	L	L	P	Q	Y	A	T	K	L	G	I	K	P	D	Q	V	E	Q	Y	Y	I	D	K	V	P	L	K	R	G	C	D	Y	Q	D	V	L	N	M	L	L	F	Y	A	S	P	K
Query Conservation
Alig confidence															.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	T	F	T	R	G	L	A	K	E	V	G	P	.	K	I	R	V	N	A	V	C	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	E	D	V	A	G	L	V	A	F	L	A	S	D	D
Template Known Secondary structure													T	T	.	T	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														S	G	G
Template Predicted Secondary structure															.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.																																									.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	Y	C	T	G	Q	S	I	N	V	T	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	Y	V	T	G	A	C	Y	D	I	N	G
Template Known Secondary structure		G	T	T			S
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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