Job Description P05707 Confidence 100.00% Date Thu Jan 5 10:58:50 GMT 2012 Rank 119 Aligned Residues 226 % Identity 27% Template c3diiB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:short-chain dehydrogenase/reductase sdr; PDBTitle: crystal structure of a carbohydrate specific scor enzyme2 from clostridium thermocellum, ligand-free form Resolution 1.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Q	V	A	V	V	I	G	G	G	Q	T	L	G	A	F	L	C	H	G	L	A	A	E	G	Y	R	V	A	V	V	D	I	Q	S	D	K	A	A	N	V	A	Q	E	I	N	A	E	Y	G	E	S	M	A	Y	G	F	G	A	D	A	T	S	E	Q	S	V	L	A	L	S	R	G	V	D	E	I	F	G	R
Query Conservation
Alig confidence																																															.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.
Template Sequence		N	R	G	V	I	V	T	G	G	G	H	G	I	G	K	Q	I	C	L	D	F	L	E	A	G	D	K	V	C	F	I	D	I	D	E	K	R	S	A	D	F	A	K	E	R	.	.	.	.	.	.	P	N	L	F	Y	F	H	G	D	V	A	D	P	L	T	L	K	K	F	V	E	Y	A	M	E	K	L	Q	R
Template Known Secondary structure									S	T	T	S													T	T								S										T	T		.	.	.	.	.	.	T	T								T	T																	S
Template Predicted Secondary structure																																															.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.							.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	L	L	V	Y	S	A	G	I	A	K	A	A	F	I	S	D	F	Q	L	G	D	F	D	R	S	L	Q	V	N	L	V	G	Y	F	L	C	A	R	E	F	S	R	L	M	I	R	D	G	I	Q	G	R	I	I	Q	I	N	S	K	S	G	K	V	G	S	K	H	N	S	G	Y	S	A	A	K	F	G	G
Query Conservation
Alig confidence																																																			.	.	.
Template Conservation																																																			.	.	.
Template Sequence		I	D	V	L	V	N	N	A	C	G	S	K	G	I	L	S	S	L	L	Y	E	E	F	D	Y	I	L	S	V	G	L	K	A	P	Y	E	L	S	R	L	C	R	D	E	L	I	K	N	K	.	.	.	G	R	I	I	N	I	A	S	T	R	A	F	Q	S	E	P	D	S	E	A	Y	A	S	A	K	G	G	I
Template Known Secondary structure															G	G	G	T														T										T								T	.	.	.									G	G	G	T	S			T	T
Template Predicted Secondary structure																																																			.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.				.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	L	T	Q	S	L	A	L	D	L	A	E	Y	G	I	T	V	H	S	L	M	L	G	N	L	L	K	S	P	M	F	Q	S	L	L	P	Q	Y	A	T	K	L	G	I	K	P	D	Q	V	E	Q	Y	Y	I	D	K	V	P	L	K	R	G	C	D	Y	Q	D	V	L	N	M	L	L	F	Y	A	S	P	K
Query Conservation
Alig confidence																.										.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Conservation																.										.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Sequence		V	A	L	T	H	A	L	A	M	S	L	G	P	D	.	V	L	V	N	C	I	A	P	G	.	W	I	N	V	T	E	F	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	E	D	C	A	A	I	P	A	G	K	V	G	T	P	K	D	I	S	N	M	V	L	F	L	C	Q	Q	.
Template Known Secondary structure													T	T	T	.	S									.	S	B							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	S	T	T	S	S		B														T		.
Template Predicted Secondary structure																.										.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.																			.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	Y	C	T	G	Q	S	I	N	V	T	G	G	Q	V	M
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	D	F	I	T	G	E	T	I	I	V	D	G	G	M	S	K
Template Known Secondary structure		.	S	S			S						S	T	T	G	G	G
Template Predicted Secondary structure		.
Template SS confidence
			216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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