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Job DescriptionP05707
Confidence99.92%DateThu Jan 5 10:58:50 GMT 2012
Rank195Aligned Residues198
% Identity18%Templatec3d7lG_
PDB info PDB header:structural genomics, unknown functionChain: G: PDB Molecule:lin1944 protein; PDBTitle: the crystal structure of the protein lin1944 from listeria innocua .
Resolution2.06 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  QVAVVIGGGQTLGAFLCHGLAAEGYRVAVVDIQSDKAANVAQEINAEYGESMAYGFGADATSEQSVLALSRGVDEIFGRV
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Template Sequence  XKILLIGASGTLGSAVKERLEKKA. EVITAGRHSG. . . . . . . . . . . . . . . . . . . . . . . DVTVDITNIDSIKKXYEQVGKV
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TTTSTTTS.SSSS.......................S

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   1........10.........20.... .....30.... .....40.........50......
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  DLLVYSAGIAKAAFISDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGV
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Template Sequence  DAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSL. . . NDKGSFTLTTGIXXEDPIVQGASAAXANGAVT
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GGG

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   57..60.........70.........80.........90.........100. ........110.........120.........130...
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  GLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDKVPLKRGCDYQDVLNMLLFYASPKA
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Template Sequence  AFAKSAAIEXPRG. IRINTVSPN. VLEESW. . . . . . . . . . . . . . . . . . . . DKLEPFFEGFLPVPAAKVARAFEKSV. . . F
Template Known Secondary structure  GGG
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BGGG....................GGGSTT


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   134.....140...... ...150..... ....160. ........170.........180....... .
 
   243......250..
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Query Sequence  SYCTGQSINV
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Template Sequence  GAQTGESYQV
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   189190........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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