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Job DescriptionP05707
Confidence100.00%DateThu Jan 5 10:58:50 GMT 2012
Rank85Aligned Residues246
% Identity17%Templatec3afnC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:carbonyl reductase; PDBTitle: crystal structure of aldose reductase a1-r complexed with nadp
Resolution1.63 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  NQVAVVIGGGQTLGAFLCHGLAAEGYRVAVVDIQSDKAANVAQEINAEYGESMAYGFGADATSEQSVLALSRGVDEIFGR
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Template Sequence  GKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGI
Template Known Secondary structure  T
TT
SSTT
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   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   82.......90.........100.........110.........120........ .130.........140.........150......
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Query Sequence  VDLLVYSAGIAKAAFISDFQLGDFDRSLQVNLVGYFLCAREFSRLMI. . . . . RDGIQGRIIQINSKSGKVGSKHNSGYSA
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Template Sequence  DVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGA
Template Known Secondary structure  S









GGG

TTS


T


TT
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   87..90.........100.........110.........120.........130.........140.........150.........160......
 
   157..160.........170.........180.........190.........200.........210.........220.........230......
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Query Sequence  AKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDKVPLKRGCDYQDVLNMLLF
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Template Sequence  AKAFLHNVHKNWVDFHTKDGVRFNIVSPG. TVDTAFHADK. . . . . . . . . . . TQDVRDRISNGIPMGRFGTAEEMAPAFLF
Template Known Secondary structure  GGGT
.SBSSGGGTT
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TTSTT
S
B
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   167..170.........180.........190..... ....200..... ....210.........220.........230....
 
   237..240. ........250.........
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Query Sequence  YASPK. ASYCTGQSINVTGGQVMF
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Template Sequence  FASHLASGYITGQVLDINGGQYKH
Template Known Secondary structure 
TT

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   235....240.........250........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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