 |
| Job Description | P05707 | | Confidence | 97.98% | Date | Thu Jan 5 10:58:50 GMT 2012 |
| Rank | 289 | Aligned Residues | 63 |
| % Identity | 17% | Template | c2vrcD_ |
| PDB info |
PDB header:oxidoreductase | Chain: D: PDB Molecule:triphenylmethane reductase; |
PDBTitle: crystal structure of the citrobacter sp. triphenylmethane2 reductase complexed with nadp(h)
|
| Resolution | 2.5 Å |
|
| | |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | |
|
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
| Predicted Secondary structure | |
|
|  | | | | |  |
|
|
|
|  | | | | | | | | | | | |
| . | . |
|
| | | | | | |
|
| | | | | | | | | | | | | | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
M | N | Q | V | A | V | V | I | G | G | G | Q | T | L | G | A | F | L | C | H | G | L | A | A | E | . |
. |
G | Y | R | V | A | V | V | D | I | Q | S | D | K | A | A | N | V | A | Q | E | I | N | A | E | Y | G | E | S | M | A | Y | G | F | G | A | D | A | T | S | E | Q | S | V | L | A | L | S | R |
| Query Conservation | |
|
|
|
|
|
|
|
|
|
|
| |
|
|
| |
|
|
| | |
|
| | | . | . |
|
| |
|
|
| | |
| | | | |
| | | | | | |
| | | | | | | | | | | | | | |
| | | | | | | | | | | | |
| Alig confidence | |
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| | . | . |
|
|
|
|
|
|
|
| |
|
| | |
|
| | |
| | | | | |
| | |
| | | | |
| | | | | | | | | | | . | . | . | . | . | . | . | . | | |
| | |
| | |
| | |
| | | | | | |
| | |
| Template Sequence | |
F | S | . |
. |
I | A | V | T | G | A | T | G | Q | L | G | G | L | V | I | Q | H | L | X | A | A | V | P | A | S | Q | I | I | A | I | V | R | N | V | E | K | A | S | T | L | A | D | . |
. |
. |
. |
. |
. |
. |
. |
Q | G | V | E | V | R | H | G | D | Y | N | Q | P | E | S | L | Q | K | A | F | A |
| Template Known Secondary structure | |
|
| . | . | | | | | S | T | T | S | | | | | | | | | | | | | | S |
| G | G | G | | | | | | S | S | G | G | G | G | | | | | | . | . | . | . | . | . | . | . | T | T |
| | | | |
|
| T | T |
| G | G | G | | | | | | T |
| Template Predicted Secondary structure | |
| | . | . | | | | |
|
|
|
| | | | | | | | | | | | |
|
|
|
|
| | | | | | |
|
| | | | | | | | | | . | . | . | . | . | . | . | . |
|
|
| | | | |
|
|
|
|
| | | | | | | | |
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
1 | . | |
|
. | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
