Job Description P05707 Confidence 99.43% Date Thu Jan 5 10:58:50 GMT 2012 Rank 211 Aligned Residues 218 % Identity 19% Template c2uv8C_ PDB info PDB header:transferase Chain: C: PDB Molecule:fatty acid synthase subunit alpha (fas2); PDBTitle: crystal structure of yeast fatty acid synthase with stalled2 acyl carrier protein at 3.1 angstrom resolution Resolution 3.10 Å

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		2	.	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure										.																			.																												.	.
Query SS confidence										.																			.																												.	.
Query Sequence		N	Q	V	A	V	V	I	G	.	G	G	Q	T	L	G	A	F	L	C	H	G	L	A	A	E	G	Y	.	R	V	A	V	V	D	I	Q	S	D	K	A	A	N	V	A	Q	E	I	N	A	E	Y	G	E	S	M	.	.	A	Y	G	F	G	A	D	A	T	S	E	Q	S	V	L	A	L	S	R	G	V	D	E
Query Conservation										.																			.																												.	.
Alig confidence										.																			.																												.	.
Template Conservation
Template Sequence		D	K	Y	V	L	I	T	G	A	G	K	G	S	I	G	A	E	V	L	Q	G	L	L	Q	G	G	A	K	V	V	V	T	T	S	R	F	S	K	Q	V	T	D	Y	Y	Q	S	I	Y	A	K	Y	G	A	K	G	S	T	L	I	V	V	P	F	N	Q	G	S	K	Q	D	V	E	A	L	I	E	F	I	Y	D
Template Known Secondary structure		T							S			S	S	S												T	T								S	S																			T	T										T	T														S
Template Predicted Secondary structure
Template SS confidence
		675	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.
		78	.	80													.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	F	G	.	.	.	.	.	.	.	.	.	.	.	.	R	V	D	L	L	V	Y	S	A	G	I	A	K	A	A	F	I	S	D	F	Q	L	G	D	F	D	R	S	L	Q	V	N	L	V	G	Y	F	L	C	A	R	E	F	S	R	L	M	I	R	D	G	I	Q	G	R	I	I	Q	I	N	S	K	S	G	K
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.																																										.	.
Template Conservation																																																										.	.
Template Sequence		T	E	K	N	G	G	L	G	W	D	L	D	A	I	I	P	F	A	A	I	P	E	Q	G	I	E	L	E	H	I	D	S	K	S	E	F	A	H	R	I	M	L	T	N	I	L	R	M	M	G	C	V	K	K	Q	K	.	.	S	A	R	G	I	E	T	R	P	A	Q	V	I	L	P	M	S	P	N	H	G	T
Template Known Secondary structure			T	T	T	T	S						S												S	B		G	G	G													T															.	.		T	T	T			S											S		T	T
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		755	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810			.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	S	K	H	N	S	G	Y	S	A	A	K	F	G	G	V	G	L	T	Q	S	L	A	L	D	L	A	E	Y	G	I	T	V	H	S	L	M	L	G	N	L	L	K	S	P	M	F	Q	S	L	L	P	Q	Y	A	T	K	L	G	I	K	P	D	Q	V	E	Q	Y	Y	I	D	K	V	P	L	K	R	G	C
Query Conservation
Alig confidence				.	.																																										.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.																																										.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	G	.	.	G	D	G	M	Y	S	E	S	K	L	S	L	E	T	L	F	N	R	W	H	S	E	S	W	A	N	Q	L	T	V	C	G	A	I	I	G	W	T	R	G	T	.	.	.	N	N	I	I	A	E	G	I	E	K	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	T	F
Template Known Secondary structure		S	S	.	.		B	T	T								G	G	G								S	S		T	T	T															.	.	.			T	T						T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		B
Template Predicted Secondary structure				.	.																																										.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		833	.			.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.				.	.	.	.	880	.	.	.	.	.	.	.																	.	.	890	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	Q	D	V	L	N	M	L	L	F	Y	A	S	P	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	Q	K	E	M	A	F	N	L	L	G	L	L	T	P	E	V
Template Known Secondary structure												G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		897	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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