Job Description P05707 Confidence 99.31% Date Thu Jan 5 10:58:50 GMT 2012 Rank 215 Aligned Residues 220 % Identity 12% Template c2gn9B_ PDB info PDB header:lyase Chain: B: PDB Molecule:udp-glcnac c6 dehydratase; PDBTitle: crystal structure of udp-glcnac inverting 4,6-dehydratase in complex2 with nadp and udp-glc Resolution 2.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		N	Q	V	A	V	V	I	G	G	G	Q	T	L	G	A	F	L	C	H	G	L	A	A	E	.	.	G	Y	R	V	A	V	V	D	I	Q	S	D	K	A	A	N	V	A	Q	E	I	N	A	E	Y	G	E	S	M	A	Y	G	F	G	A	D	A	T	S	E	Q	S	V	L	A	L	S	R	G	V	D	E	I	F
Query Conservation																										.	.
Alig confidence																										.	.																								.	.	.	.
Template Conservation																																																			.	.	.	.
Template Sequence		N	Q	T	I	L	I	T	G	G	T	G	S	F	G	K	C	F	V	R	K	V	L	D	T	T	N	A	K	K	I	I	V	Y	S	R	D	E	L	K	Q	S	E	M	A	M	E	F	N	D	.	.	.	.	P	R	M	R	F	F	I	G	D	V	R	D	L	E	R	L	N	Y	A	L	E	G	V	D	I	C	I
Template Known Secondary structure		S							T	T	T	S														S	B		S							S												S			.	.	.	.	T	T								T	T									T	T	T		S
Template Predicted Secondary structure																																																			.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.					.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	V	D	L	L	V	Y	S	A	G	I	A	K	A	A	F	I	S	D	F	Q	L	G	D	F	D	R	S	L	Q	V	N	L	V	G	Y	F	L	C	A	R	E	F	S	R	L	M	I	R	D	G	I	Q	G	R	I	I	Q	I	N	S	K	S	G	K	V	G	S	K	H	N	S	G	Y	S	A	A	K	F
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.
Template Sequence		H	A	A	A	L	K	H	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	E	Y	N	P	L	E	C	I	K	T	N	I	M	G	A	S	N	V	I	N	A	C	L	K	N	A	I	S	Q	V	I	A	L	S	T	D	K	A	A	N	P	I	.	.	.	N	L	Y	G	A	T	K	L
Template Known Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S																						T	T		S								G	G	G	S	S			.	.	.	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.																	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.				.	140	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.									.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.
Query Sequence		G	G	V	G	L	T	Q	S	L	A	L	D	L	A	E	Y	G	I	T	V	H	S	L	M	L	G	N	L	L	K	S	P	M	F	Q	S	L	L	P	Q	Y	A	T	K	L	G	I	K	P	D	Q	V	E	Q	Y	Y	I	D	K	V	P	L	K	.	.	.	.	.	.	.	.	R	G	C	D	Y	Q	D	V	L
Query Conservation																																																																	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	S	D	K	L	F	V	S	A	N	N	F	K	G	S	S	Q	T	Q	F	S	V	V	R	Y	G	N	V	.	.	.	.	.	.	.	.	.	.	.	.	V	G	S	R	G	S	V	V	P	F	F	K	K	L	V	Q	N	K	A	S	E	I	P	I	T	D	I	R	M	T	R	F	W	I	T	L	D	E	G	V
Template Known Secondary structure										G	G	G			S	S	S													.	.	.	.	.	.	.	.	.	.	.	.	S	S		T	T		S	T	T								T			S					S		S	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.													.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	M	L	L	F	Y	A	S	P	K	A	S	Y	C	T	G	Q	S	I	N	V	T	G	G	Q	V	M	F
Query Conservation
Alig confidence													.	.	.
Template Conservation													.	.	.
Template Sequence		S	F	V	L	K	S	L	K	R	M	H	.	.	.	G	G	E	I	F	V	P	K	I	P	S	M	K	M
Template Known Secondary structure													.	.	.	S	S												S
Template Predicted Secondary structure													.	.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.				.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions