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Job DescriptionP05707
Confidence100.00%DateThu Jan 5 10:58:50 GMT 2012
Rank100Aligned Residues241
% Identity24%Templatec2dteB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:glucose 1-dehydrogenase related protein; PDBTitle: structure of thermoplasma acidophilum aldohexose dehydrogenase (aldt)2 in complex with nadh
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  NQVAVVIGGGQTLGAFLCHGLAAEGYRVAVVDIQSDKAANVAQEINAEYGESMAYGFGADATSEQSVLALSRGVDEIFGR
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Template Sequence  DKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIH. . . . . . . . . . . . . DPGEAKYDHIECDVTNPDQVKASIDHIFKEYGS
Template Known Secondary structure  T
T
SSTT
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TT
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   7..10.........20.........30.........40 .........50.........60.........70...
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  VDLLVYSAGIAKAAFISDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGG
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Template Sequence  ISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAI. PYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAV
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B
TTTS
T.TTSSS


GGGTS

TTB
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   74.....80.........90.........100.........110...... ...120.........130.........140.........150..
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  VGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDKVPLKRGCDYQDVLNMLLFYASPK
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Template Sequence  IGLTKSIALDYAPL. LRCNAVCPA. TIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASRE
Template Known Secondary structure  TTT.S
.SBSS
S
STTSS
B
SGG
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   153......160...... ...170..... ....180.........190.........200.........210.........220.........230
 
   242.......250........
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Query Sequence  ASYCTGQSINVTGGQVM
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Template Sequence  ASFITGTCLYVDGGLSI
Template Known Secondary structure  GTT

S
STTGGG
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   231........240.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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