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Job DescriptionP05707
Confidence98.84%DateThu Jan 5 10:58:50 GMT 2012
Rank232Aligned Residues241
% Identity10%Templatec2c20D_
PDB info PDB header:isomeraseChain: D: PDB Molecule:udp-glucose 4-epimerase; PDBTitle: crystal structure of udp-glucose 4-epimerase
Resolution2.7 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  VAVVIGGGQTLGAFLCHGLAAEGYRVAVVDIQSDKAANVAQEINAEYGESMAYGFGADATSEQSVLALSRGVDEIFGRVD
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Template Sequence  SILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED. . . . . . . . AITEGAKFYNGDLRDKAFLRDVFT. . . QENIEAV
Template Known Secondary structure  TTTSTT



SSS
GG........GS
SSS

TT
...TS
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   3......10.........20.........30.........40 .........50.........60.... .....70.
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  LLVYSAGIAKAAFISDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVG
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Template Sequence  MHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEK
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T



GGGG




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S
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   72.......80.........90.........100.........110.........120.........130.........140.........150.
 
   164.....170.........180.........190.........200.........210.........220....... .
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Query Sequence  LTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDKVPLKRGCDY. . . . . . . . . . . . . . . Q
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Template Sequence  MLHWYSQA. . . SNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVE
Template Known Secondary structure  T...SS

S


TT
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S
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   152....... 160.........170.........180.........190.........200.........210.........220........
 
   229230.........240.........250........
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Query Sequence  DVLNMLLFYASPKASYCTGQSINVTGGQVM
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Template Sequence  DLVAAHFLGLKDLQNGGESDFYNLGNGNGF
Template Known Secondary structure  TT





TT
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   229230.........240.........250........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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