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Job DescriptionP05707
Confidence100.00%DateThu Jan 5 10:58:50 GMT 2012
Rank84Aligned Residues240
% Identity20%Templatec2b4qB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:rhamnolipids biosynthesis 3-oxoacyl-[acyl- PDBTitle: pseudomonas aeruginosa rhlg/nadp active-site complex
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  NQVAVVIGGGQTLGAFLCHGLAAEGYRVAVVDIQSDKAANVAQEINAEYGESMAYGFGADATSEQSVLALSRGVDEIFGR
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Template Sequence  GRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGD. . . CQAIPADLSSEAGARRLAQALGELSAR
Template Known Secondary structure  T
TTTST

S
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SSTT
S
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   910.........20.........30.........40.........50........ .60.........70.........80.....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  VDLLVYSAGIAKAAFISDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGG
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Template Sequence  LDILVNNAGTS. . . . PVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAAL
Template Known Secondary structure 
S




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GGGT

SSS


GGGT
S


S
TT
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   86...90...... ...100.........110.........120.........130.........140.........150.........160.
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  VGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDKVPLKRGCDYQDVLNMLLFYASPK
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Template Sequence  HQLSRMLAKELVGEHINVNVIAPG. RFPSRMTRHIAN. . . . . . . . . DPQALEADSASIPMGRWGRPEEMAALAISLAGTA
Template Known Secondary structure  GGGT
.S


GGG.........
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SGG
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   170.........180.........190... ......200..... ....210.........220.........230.........
 
   242.......250........
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Query Sequence  ASYCTGQSINVTGGQVM
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Template Sequence  GAYMTGNVIPIDGGFHL
Template Known Secondary structure  GTT

S
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   240.........250......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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