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Job DescriptionP05707
Confidence100.00%DateThu Jan 5 10:58:50 GMT 2012
Rank5Aligned Residues256
% Identity24%Templatec1w4zA_
PDB info PDB header:antibiotic biosynthesisChain: A: PDB Molecule:ketoacyl reductase; PDBTitle: structure of actinorhodin polyketide (actiii) reductase
Resolution2.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  NQVAVVIGGGQTLGAFLCHGLAAEGYRVAVVDIQSDKAANVAQEINAEYGESMAYGFGADATSEQSVLALSRGVDEIFGR
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Template Sequence  SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD
Template Known Secondary structure  S
S
SSTT
S
TT



TT
T
S
S
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   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  VDLLVYSAGIAKAAFISDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGG
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Template Sequence  VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKA. GGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGV
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S
GGG

TTT.TST


GGGTS

TT
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   86...90.........100.........110.........120........ .130.........140.........150.........160....
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  VGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDKVPLKRGCDYQDVLNMLLFYASPK
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Template Sequence  VGFTKALGLELARTGITVNAVCPGFV. ETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPG
Template Known Secondary structure  GGGT
SB.
STT

TTSTTSS
B
TSGG
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   165....170.........180.........190 .........200.........210.........220.........230.........240...
 
   242.......250.........
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Query Sequence  ASYCTGQSINVTGGQVMF
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Template Sequence  AAAVTAQALNVCGGLGNY
Template Known Secondary structure  GTT

S
STT



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   244.....250.........260.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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