Job Description P21345 Confidence 100.00% Date Thu Jan 5 11:38:04 GMT 2012 Rank 1 Aligned Residues 392 % Identity 36% Template d2nwwa1 SCOP info Proton glutamate symport protein Proton glutamate symport protein Proton glutamate symport protein Resolution 3.20

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	W	Q	I	L	F	A	M	V	L	G	I	L	L	G	S	Y	L	H	Y	H	S	D	S	R	D	W	L	V	V	N	L	L	S	P	A	G	D	I	F	I	H	L	I	K	M	I	V	V	P	I	V	I	S	T	L	V	V	G	I	A	G	V	G	D	A	K	Q	L	G	R	I	G	A	K	T	I	I	Y
Query Conservation
Alig confidence																								.	.																																											.
Template Conservation																								.	.																																											.
Template Sequence		V	L	Q	K	I	L	I	G	L	I	L	G	A	I	V	G	L	I	L	G	H	Y	.	.	G	Y	A	H	A	V	H	T	Y	V	K	P	F	G	D	L	F	V	R	L	L	K	M	L	V	M	P	I	V	F	A	S	L	V	V	G	A	A	S	I	S	P	.	A	R	L	G	R	V	G	V	K	I	V	V	Y
Template Known Secondary structure				S																		T	T	.	.	T	T					T	T	T	T																									T	T	T		S		T	T	.	T	T
Template Predicted Secondary structure																								.	.																																											.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	V	I	T	T	V	A	I	I	L	G	I	T	L	A	N	V	F	Q	P	G	A	G	V	D	M	S	Q	L	A	T	V	D	I	S	K	Y	Q	S	T	T	E	A	V	Q	S	S	S	H	G	I	M	G	T	I	L	S	L	V	P	T	N	I	V	A	S	M	A	K	G	E	M	L	P	I	I	F	F	S
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	L	L	T	S	A	F	A	V	T	L	G	I	I	M	A	R	L	F	N	P	G	A	G	I	H	L	A	V	G	G	Q	.	.	.	.	.	.	.	.	.	.	Q	F	Q	P	H	Q	A	P	P	L	V	H	I	L	L	D	I	V	P	T	N	P	F	G	A	L	A	N	G	Q	V	L	P	T	I	F	F	A
Template Known Secondary structure																				S		S												.	.	.	.	.	.	.	.	.	.															G	G	G	S		S								S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120											.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.								.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure													.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.
Query Sequence		V	L	F	G	L	G	L	S	S	L	P	.	.	.	.	.	.	.	A	T	H	R	E	P	L	V	T	V	F	R	S	I	S	E	T	M	F	K	V	T	H	M	V	M	R	Y	A	P	V	G	V	F	A	L	I	A	V	T	V	A	N	F	G	F	S	S	L	W	P	L	A	K	L	V	L	L	V	H	F	A
Query Conservation													.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	I	L	G	I	A	I	T	Y	L	M	N	S	E	N	E	K	V	R	K	S	A	E	T	L	L	D	A	I	N	G	L	A	E	A	M	Y	K	I	V	N	G	V	M	Q	Y	A	P	I	G	V	F	A	L	I	A	Y	V	M	A	E	Q	G	V	H	V	V	G	E	L	A	K	V	T	A	A	V	Y	V	G
Template Known Secondary structure												T	T		S		T	T																											T	T	S																T	G	G	G			T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	F	F	A	L	V	V	L	G	I	V	A	R	L	C	G	L	S	V	W	I	L	I	R	I	L	K	D	E	L	I	L	A	Y	S	T	A	S	S	E	S	V	L	P	R	I	I	E	K	M	E	A	Y	G	A	P	V	S	I	T	S	F	V	V	P	T	G	Y	S	F	N	L	D	G	S	T	L	Y	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	L	Q	I	L	L	V	Y	F	V	L	L	K	I	Y	G	I	D	P	I	S	F	I	K	H	A	K	D	A	M	L	T	A	F	V	T	R	S	S	S	G	T	L	P	V	T	M	R	V	A	K	E	M	G	I	S	E	G	I	Y	S	F	T	L	P	L	G	A	T	I	N	M	D	G	T	A	L	Y	Q
Template Known Secondary structure									T							T	T	T																							T	G	G	G										T	T	T			T	T	T					T	T	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.							.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.
Query Sequence		S	I	A	A	I	F	I	A	Q	L	Y	G	I	D	L	S	I	W	Q	E	I	I	L	V	L	T	L	M	V	T	S	K	G	I	A	G	V	P	G	V	S	F	V	V	L	L	A	T	L	G	S	V	G	I	P	L	.	.	.	.	.	.	E	G	L	A	F	I	A	G	V	D	R	I	L	D	M	A	R	T
Query Conservation																																																										.	.	.	.	.	.
Alig confidence																																																										.	.	.	.	.	.
Template Conservation
Template Sequence		G	V	C	T	F	F	I	A	N	A	L	G	S	H	L	T	V	G	Q	Q	L	T	I	V	L	T	A	V	L	A	S	I	G	T	A	G	V	P	G	A	G	A	I	M	L	A	M	V	L	H	S	V	G	L	P	L	T	D	P	N	V	A	A	A	Y	A	M	I	L	G	I	D	A	I	L	D	M	G	R	T
Template Known Secondary structure													T					S	S	T	T													T	T	S	S		T	T														T			T	T	S											G	G	G
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	N	V	V	G	N	A	L	A	V	L	V	I	A	K	W	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	V	N	V	T	G	D	L	T	G	T	A	I	V	A	K	T	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.