Return to main results Retrieve Phyre Job Id

Job DescriptionP21345
Confidence7.49%DateThu Jan 5 11:38:04 GMT 2012
Rank21Aligned Residues100
% Identity8%Templated1iwga7
SCOP infoMultidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain
Resolution3.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   159160.........170. ........180.........190.........200.........210.........220... ......230
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Query Sequence  EMLPIIFFSVLFG. . . . . . . LGLSSLPATHREPLVTVFRSISETMFKVTHMVMRYAPVGVFALIAVTVANFG. FSSLWPL
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Template Sequence  NTLTMFGMVLAIGLLVDDAIVVVENVERVMAEEGLPPKEATRKSMGQIQGALVGIAMVLSAVFVPMAFFGGSTGAIYRQF
Template Known Secondary structure 
TS

SGGGTTTTT


TTS
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   391........400.........410.........420.........430.........440.........450.........460.........470
 
   231........240.........250........
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Query Sequence  AKLVLLVHFAILFFALVVLGIVARLCGL
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Template Sequence  SITIVSAMALSVLVALILTPALCATMLK
Template Known Secondary structure  TTTS

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   471........480.........490........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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