Job Description P21345 Confidence 3.51% Date Thu Jan 5 11:38:04 GMT 2012 Rank 62 Aligned Residues 47 % Identity 17% Template c2wlvA_ PDB info PDB header:virus protein Chain: A: PDB Molecule:gag polyprotein; PDBTitle: structure of the n-terminal capsid domain of hiv-2 Resolution 1.25 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		373	.	.	.	.	.	.	380	.	.			.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410				.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.																													.	.	.
Query SS confidence												.	.																													.	.	.
Query Sequence		G	I	P	L	E	G	L	A	F	I	.	.	A	G	V	D	R	I	L	D	M	A	R	T	A	L	N	V	V	G	N	A	L	A	V	L	V	I	A	K	.	.	.	W	E	H	K	F	D	R	K	K
Query Conservation												.	.																													.	.	.
Alig confidence												.	.																													.	.	.
Template Conservation
Template Sequence		K	F	G	A	E	V	V	P	G	F	Q	A	L	S	E	G	C	T	P	Y	D	I	N	Q	M	L	N	C	V	G	D	H	Q	A	A	M	Q	I	I	R	E	I	I	N	E	E	A	A	E	W	D	V
Template Known Secondary structure		T	S		T	T									T	T	T												T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions