 |
Job Description | P67338 | Confidence | 5.12% | Date | Thu Jan 5 12:10:34 GMT 2012 |
Rank | 41 | Aligned Residues | 26 |
% Identity | 31% | Template | c3cnfB_ |
PDB info |
PDB header:virus | Chain: B: PDB Molecule:vp1; |
PDBTitle: 3.88 angstrom structure of cytoplasmic polyhedrosis virus2 by cryo-electron microscopy
|
Resolution | 3.88 Å |
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | P | S | L | T | H | E | Q | Q | Q | K | A | V | E | R | I | Q | E | L | M | A | Q | G | M | S | S | G | Q |
Query Conservation |   |
|
|   |
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |
|   |   |
|   |   |
|   |   |
|   |   |   |   | . | . |   |   |   |   |   |
|
Template Sequence |   |
M | P | T | L | S | T | S | Q | I | R | H | A | I | E | R | I | A | Q | I | T | . |
. |
D | V | D | S | T | D |
Template Known Secondary structure |   |
S |
| S | S | S |
|
| S | T | T |  |  |  |  |  |  |  | T | T | T | . | . | T |
|
| T | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
971 | . | . | . | . | . | . | . | . | 980 | . | . | . | . | . | . | . | . | . | 990 | |
|
. | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|