Job Description P30860 Confidence 97.33% Date Thu Jan 5 11:46:37 GMT 2012 Rank 56 Aligned Residues 185 % Identity 9% Template d2czla1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.55

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	E	C	T	F	T	N	H	A	F	D	S	L	I	P	S	L	K	F	R	K	Y	D	A	V	I	S	G	M	D	I	T	P	E	R	S	K	Q	V	S	F	T	T	P	Y	Y	E	N	S	A	V	V	I	A	K	K	D	T	Y	K	T	F	A	D	L	K	G	K	R	I	G	M	E	N	G	T	T	H	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	P	L	E	P	V	L	E	D	V	E	T	L	N	R	W	A	L	E	G	R	L	P	L	T	K	L	S	Y	A	A	Y	A	Q	V	R	D	R	Y	V	A	L	R	S	G	G	A	L	G	R	G	V	G	P	L	V	V	A	R	G	P	L	Q	A	L	E	G	L	R	V	A	V	P	G	R	H	T	T	A
Template Known Secondary structure		S	S																		T	T			S										T	T		T	T	T					S	S	S					S	S								S	S			S			T	T						S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.
Predicted Secondary structure																																																										.	.																			.
Query SS confidence																																																										.	.																			.
Query Sequence		K	Y	I	Q	D	Q	H	P	E	V	K	T	V	S	Y	D	S	Y	Q	N	A	F	I	D	L	K	N	G	R	I	D	G	V	F	G	D	T	A	V	V	N	E	W	L	K	T	N	P	Q	L	G	V	A	T	E	K	.	.	V	T	D	P	Q	Y	F	G	T	G	L	G	I	A	V	R	P	D	.	N	K	A
Query Conservation																																																										.	.																			.
Alig confidence																																																										.	.																			.
Template Conservation
Template Sequence		Y	F	L	L	S	L	Y	A	Q	G	F	V	P	V	E	V	R	Y	D	R	I	L	P	M	V	A	Q	G	E	V	E	A	G	L	I	I	H	E	S	R	F	T	Y	P	R	Y	G	L	V	Q	V	V	D	L	G	A	W	W	E	E	R	T	G	L	P	L	P	L	G	A	I	L	A	R	R	D	L	G	E	G
Template Known Secondary structure										S	S								G	G	G							T	T	S	S	S						T	T					G	G	G	G	T																S	S											G	G	G
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230						.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																	.	.	.	.	.
Query SS confidence																	.	.	.	.	.
Query Sequence		L	L	E	K	L	N	N	A	L	A	A	I	K	A	D	.	.	.	.	.	G	T	Y	Q	K	I	S	D	Q	W	F	P	Q
Query Conservation																	.	.	.	.	.
Alig confidence																	.	.	.	.	.
Template Conservation
Template Sequence		L	I	R	A	L	D	E	A	V	R	R	S	V	A	Y	A	L	A	H	P	E	E	A	L	D	Y	M	R	A	H	A	Q	E
Template Known Secondary structure																				S	G	G	G	G									T	T
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions